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    LOC9311118 probable mitochondrial import inner membrane translocase subunit TIM21 [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9311118, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9311118
    Gene description
    probable mitochondrial import inner membrane translocase subunit TIM21
    Locus tag
    ARALYDRAFT_912250
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See LOC9311118 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302550.1 (25073244..25075609)

    NW_003302550.1Genomic Context describing neighboring genes Neighboring gene transcription factor UNE10 Neighboring gene type III polyketide synthase C Neighboring gene probable plastid-lipid-associated protein 11 Neighboring gene actin-related protein 2/3 complex subunit 5A Neighboring gene uncharacterized LOC110227687 Neighboring gene cationic amino acid transporter 9, chloroplastic

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003302550 Unplaced Scaffold Reference v.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein import into mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TIM23 mitochondrial import inner membrane translocase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable mitochondrial import inner membrane translocase subunit TIM21

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302550.1 Reference v.1.0 Primary Assembly

      Range
      25073244..25075609
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021022873.1 → XP_020878532.1  probable mitochondrial import inner membrane translocase subunit TIM21

      UniProtKB/TrEMBL
      D7M6B7
      Conserved Domains (1) summary
      cl21648
      Location:163 → 264
      Coa1; Cytochrome oxidase complex assembly protein 1
    Nucleotide Protein
    Heading Accession and Version

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