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    KYAT1 kynurenine aminotransferase 1 [ Sus scrofa (pig) ]

    Gene ID: 100515071, updated on 3-Dec-2024

    Summary

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    Official Symbol
    KYAT1provided by VGNC
    Official Full Name
    kynurenine aminotransferase 1provided by VGNC
    Primary source
    VGNC:VGNC:103115
    See related
    Ensembl:ENSSSCG00000005663
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in kidney (RPKM 9.4), liver (RPKM 6.6) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See KYAT1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 1 NC_010443.5 (269172628..269209553, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 1 NC_010443.4 (303188686..303225635, complement)

    Chromosome 1 - NC_010443.5Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 13 Neighboring gene endonuclease G Neighboring gene SPOUT domain containing methyltransferase 1 Neighboring gene leucine rich repeat containing 8 VRAC subunit A Neighboring gene phytanoyl-CoA dioxygenase domain containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
    2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables kynurenine-oxoglutarate transaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kynurenine--oxoglutarate transaminase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010443.5 Reference Sscrofa11.1 Primary Assembly

      Range
      269172628..269209553 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021069820.1 → XP_020925479.1  kynurenine--oxoglutarate transaminase 1 isoform X6

      UniProtKB/TrEMBL
      A0A287B5W3, A0A4X1TJY5
      Related
      ENSSSCP00000051847.3, ENSSSCT00000057949.3
      Conserved Domains (1) summary
      cl27741
      Location:24 → 422
      Aminotran_1_2; Aminotransferase class I and II

    2. XM_013993919.2 → XP_013849373.1  kynurenine--oxoglutarate transaminase 1 isoform X5

      UniProtKB/TrEMBL
      A0A8D1M937
      Conserved Domains (2) summary
      cd00609
      Location:31 → 445
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PRK08912
      Location:24 → 450
      PRK08912; hypothetical protein; Provisional

    3. XM_003122209.6 → XP_003122257.1  kynurenine--oxoglutarate transaminase 1 isoform X4

      See identical proteins and their annotated locations for XP_003122257.1

      UniProtKB/TrEMBL
      A0A5G2QJ54, A0A8D1MAK1, A0A8D1RI63
      Related
      ENSSSCP00000062054.1, ENSSSCT00000090159.1
      Conserved Domains (2) summary
      cd00609
      Location:65 → 451
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PRK08912
      Location:58 → 456
      PRK08912; hypothetical protein; Provisional

    4. XM_013993916.2 → XP_013849370.1  kynurenine--oxoglutarate transaminase 1 isoform X2

      UniProtKB/TrEMBL
      A0A8D1M937, A0A8D1RP60
      Related
      ENSSSCP00000079310.1, ENSSSCT00000102504.1
      Conserved Domains (2) summary
      cd00609
      Location:65 → 479
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PRK08912
      Location:58 → 484
      PRK08912; hypothetical protein; Provisional

    5. XM_013993917.2 → XP_013849371.1  kynurenine--oxoglutarate transaminase 1 isoform X2

      UniProtKB/TrEMBL
      A0A8D1M937, A0A8D1RP60
      Conserved Domains (2) summary
      cd00609
      Location:65 → 479
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PRK08912
      Location:58 → 484
      PRK08912; hypothetical protein; Provisional

    6. XM_013993920.2 → XP_013849374.1  kynurenine--oxoglutarate transaminase 1 isoform X5

      UniProtKB/TrEMBL
      A0A8D1M937
      Conserved Domains (2) summary
      cd00609
      Location:31 → 445
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PRK08912
      Location:24 → 450
      PRK08912; hypothetical protein; Provisional

    7. XM_003480618.4 → XP_003480666.1  kynurenine--oxoglutarate transaminase 1 isoform X4

      See identical proteins and their annotated locations for XP_003480666.1

      UniProtKB/TrEMBL
      A0A5G2QJ54, A0A8D1MAK1, A0A8D1RI63
      Conserved Domains (2) summary
      cd00609
      Location:65 → 451
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PRK08912
      Location:58 → 456
      PRK08912; hypothetical protein; Provisional

    8. XM_005660504.3 → XP_005660561.1  kynurenine--oxoglutarate transaminase 1 isoform X6

      See identical proteins and their annotated locations for XP_005660561.1

      UniProtKB/TrEMBL
      A0A287B5W3, A0A4X1TJY5
      Conserved Domains (1) summary
      cl27741
      Location:24 → 422
      Aminotran_1_2; Aminotransferase class I and II

    9. XM_013993915.2 → XP_013849369.1  kynurenine--oxoglutarate transaminase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8D1FNG4, A0A8D1U832, A0A8D2C880, A0A8W4FI12
      Related
      ENSSSCP00000077953.1, ENSSSCT00000098974.1
      Conserved Domains (2) summary
      cd00609
      Location:66 → 480
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PRK08912
      Location:59 → 485
      PRK08912; hypothetical protein; Provisional

    10. XM_005660500.3 → XP_005660557.1  kynurenine--oxoglutarate transaminase 1 isoform X3

      UniProtKB/TrEMBL
      A0A8D0R565, A0A8D0XBD8, A0A8D1T4Q0
      Conserved Domains (2) summary
      cd00609
      Location:66 → 452
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PRK08912
      Location:59 → 457
      PRK08912; hypothetical protein; Provisional

    RNA

    1. XR_002337758.1 RNA Sequence

    2. XR_002337757.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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