U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    Or52z1 olfactory receptor family 52 subfamily Z member 1 [ Mus musculus (house mouse) ]

    Gene ID: 18368, updated on 27-Nov-2024

    Summary

    Official Symbol
    Or52z1provided by MGI
    Official Full Name
    olfactory receptor family 52 subfamily Z member 1provided by MGI
    Primary source
    MGI:MGI:1341911
    See related
    Ensembl:ENSMUSG00000047535 AllianceGenome:MGI:1341911
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    3'[b]1; Olfr67; 3'beta1; MOR31-1
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Or52z1 in Genome Data Viewer
    Location:
    7 E3; 7 54.85 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (103436419..103441037, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (103787212..103791830, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 52 subfamily A member 5B Neighboring gene olfactory receptor family 52 subfamily A member 5 Neighboring gene beta-globin 3' hypersensitive site 1 Neighboring gene beta2-globin 3' enhancer Neighboring gene STARR-positive B cell enhancer ABC_E10458 Neighboring gene STARR-positive B cell enhancer ABC_E6577 Neighboring gene hemoglobin, beta adult t chain Neighboring gene B1-559 region downstream of beta(major)-globin gene Neighboring gene beta1-globin 3' enhancer Neighboring gene hemoglobin, beta adult s chain

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity ISA
    Inferred from Sequence Alignment
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in membrane ISA
    Inferred from Sequence Alignment
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    olfactory receptor 67
    Names
    GA_x6K02T2PBJ9-6515150-6514170
    olfactory receptor MOR31-1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013619.3NP_038647.2  olfactory receptor 67

      See identical proteins and their annotated locations for NP_038647.2

      Status: VALIDATED

      Source sequence(s)
      AC131116
      Consensus CDS
      CCDS40059.1
      UniProtKB/TrEMBL
      F8VPJ8, Q9WVD9
      Related
      ENSMUSP00000138389.2, ENSMUST00000183254.3
      Conserved Domains (2) summary
      pfam00001
      Location:47299
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:38315
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      103436419..103441037 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)