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    rno PHD finger protein rhinoceros [ Aedes aegypti (yellow fever mosquito) ]

    Gene ID: 5565534, updated on 12-Oct-2024

    Summary

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    Gene symbol
    rno
    Gene description
    PHD finger protein rhinoceros
    See related
    VectorBase:AAEL019740
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aedes aegypti
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
    Also known as
    AAEL004834; AAEL004849
    Orthologs
    fruit fly all
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    Genomic context

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    See rno in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current AaegL5.0 (GCF_002204515.2) 2 NC_035108.1 (115534084..115595192, complement)

    Chromosome 2 - NC_035108.1Genomic Context describing neighboring genes Neighboring gene protein lin-7 homolog B-like Neighboring gene F-BAR and double SH3 domains protein 2 Neighboring gene BTB/POZ domain-containing protein mrityu Neighboring gene Glycerol kinase 1 Neighboring gene acireductone dioxygenase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_035108.1 Chromosome 2 Reference AaegL5.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The neurotranscriptome of the Aedes aegypti mosquito. Matthews BJ, et al. BMC Genomics, 2016 Jan 6. PMID 26738925, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PHD finger protein rhinoceros

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Aedes aegypti Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AaegL5.0 Primary Assembly

    Genomic

    1. NC_035108.1 Reference AaegL5.0 Primary Assembly

      Range
      115534084..115595192 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021842048.1 → XP_021697740.1  PHD finger protein rhinoceros

      UniProtKB/TrEMBL
      A0A6I8TWF8
      Conserved Domains (5) summary
      cd15707
      Location:295 → 408
      ePHD_RNO; Extended PHD finger found in Drosophila melanogaster PHD finger protein rhinoceros (RNO) and similar proteins
      cl25574
      Location:677 → 863
      TOP2c; TopoisomeraseII
      cl26511
      Location:1377 → 1973
      Neuromodulin_N; Gap junction protein N-terminal region
      cl26518
      Location:125 → 568
      EPL1; Enhancer of polycomb-like
      cl28267
      Location:1099 → 1272
      FimV; Tfp pilus assembly protein FimV [Cell motility, Extracellular structures]

    2. XM_021842047.1 → XP_021697739.1  PHD finger protein rhinoceros

      UniProtKB/TrEMBL
      A0A6I8TWF8
      Conserved Domains (5) summary
      cd15707
      Location:295 → 408
      ePHD_RNO; Extended PHD finger found in Drosophila melanogaster PHD finger protein rhinoceros (RNO) and similar proteins
      cl25574
      Location:677 → 863
      TOP2c; TopoisomeraseII
      cl26511
      Location:1377 → 1973
      Neuromodulin_N; Gap junction protein N-terminal region
      cl26518
      Location:125 → 568
      EPL1; Enhancer of polycomb-like
      cl28267
      Location:1099 → 1272
      FimV; Tfp pilus assembly protein FimV [Cell motility, Extracellular structures]

    3. XM_021842049.1 → XP_021697741.1  PHD finger protein rhinoceros

      UniProtKB/TrEMBL
      A0A6I8TWF8
      Conserved Domains (5) summary
      cd15707
      Location:295 → 408
      ePHD_RNO; Extended PHD finger found in Drosophila melanogaster PHD finger protein rhinoceros (RNO) and similar proteins
      cl25574
      Location:677 → 863
      TOP2c; TopoisomeraseII
      cl26511
      Location:1377 → 1973
      Neuromodulin_N; Gap junction protein N-terminal region
      cl26518
      Location:125 → 568
      EPL1; Enhancer of polycomb-like
      cl28267
      Location:1099 → 1272
      FimV; Tfp pilus assembly protein FimV [Cell motility, Extracellular structures]
    Nucleotide Protein Strain
    Heading Accession and Version

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