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    LOC110833051 sorting nexin-2-like [ Zootermopsis nevadensis ]

    Gene ID: 110833051, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC110833051
    Gene description
    sorting nexin-2-like
    Locus tag
    L798_10347
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zootermopsis nevadensis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Termopsidae; Zootermopsis
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    Genomic context

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    See LOC110833051 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current ZooNev1.0 (GCF_000696155.1) Unplaced Scaffold NW_019059992.1 (459454..469397)

    NW_019059992.1Genomic Context describing neighboring genes Neighboring gene Protein on ecdysone puffs Neighboring gene protein PRRC1-like Neighboring gene uncharacterized LOC110833049 Neighboring gene serine/threonine-protein phosphatase 4 regulatory subunit 4-like Neighboring gene cell division control protein 42 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019059992 Unplaced Scaffold Reference ZooNev1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in early endosome to Golgi transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-2-like
    Names
    Sorting nexin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zootermopsis nevadensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ZooNev1.0 Primary Assembly

    Genomic

    1. NW_019059992.1 Reference ZooNev1.0 Primary Assembly

      Range
      459454..469397
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022070651.1 → XP_021926343.1  sorting nexin-2-like isoform X1

      Conserved Domains (2) summary
      cd06859
      Location:85 → 210
      PX_SNX1_2_like; The phosphoinositide binding Phox Homology domain of Sorting Nexins 1 and 2
      cd07623
      Location:239 → 465
      BAR_SNX1_2; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 1 and 2

    2. XM_022070652.1 → XP_021926344.1  sorting nexin-2-like isoform X2

      UniProtKB/TrEMBL
      A0A067RBF7
      Conserved Domains (2) summary
      cd06859
      Location:85 → 210
      PX_SNX1_2_like; The phosphoinositide binding Phox Homology domain of Sorting Nexins 1 and 2
      cd07623
      Location:239 → 462
      BAR_SNX1_2; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 1 and 2
    Nucleotide Protein
    Heading Accession and Version

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