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    NECTIN4 nectin cell adhesion molecule 4 [ Phocoena phocoena (harbor porpoise) ]

    Gene ID: 136122171, updated on 26-Jun-2024

    Summary

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    Gene symbol
    NECTIN4
    Gene description
    nectin cell adhesion molecule 4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Phocoena phocoena
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
    Also known as
    PVRL4
    Orthologs
    human mouse all
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    Genomic context

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    See NECTIN4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_06 current mPhoPho1.1 (GCF_963924675.1) 1 NC_089219.1 (117171703..117188359, complement)

    Chromosome 1 - NC_089219.1Genomic Context describing neighboring genes Neighboring gene upstream transcription factor 1 Neighboring gene Rho GTPase activating protein 30 Neighboring gene kelch domain containing 9 Neighboring gene prefoldin subunit 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_089219.1 Chromosome 1 Reference mPhoPho1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in symbiont entry into host cell IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nectin-4
    Names
    Poliovirus receptor-related protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_963924675.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mPhoPho1.1

    Genomic

    1. NC_089219.1 Reference mPhoPho1.1

      Range
      117171703..117188359 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_065876023.1 → XP_065732095.1  nectin-4 isoform X2

    2. XM_065876013.1 → XP_065732085.1  nectin-4 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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