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    ETFBETA electron transfer flavoprotein beta [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834363, updated on 18-Sep-2024

    Summary

    Official Symbol
    ETFBETA
    Official Full Name
    electron transfer flavoprotein beta
    Primary source
    TAIR:AT5G43430
    Locus tag
    AT5G43430
    See related
    Araport:AT5G43430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    electron transfer flavoprotein beta; MWF20.14; MWF20_14
    Summary
    Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis. Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness. Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation.
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    Genomic context

    See ETFBETA in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (17453517..17455297)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene RING/U-box superfamily protein Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

    Bibliography

    Pathways from PubChem

    Interactions

    General gene information

    NM_001036925.2
    NM_001085230.2
    NM_123709.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in chloroplast  
    located_in mitochondrion PubMed 
    located_in mitochondrion PubMed 
    located_in mitochondrion  
    located_in plastid PubMed 

    General protein information

    Preferred Names
    electron transfer flavoprotein beta
    NP_001032002.1
    • electron transfer flavoprotein beta (ETFBETA); FUNCTIONS IN: electron carrier activity; INVOLVED IN: chlorophyll catabolic process, leucine catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, beta subunit (InterPro:IPR012255), Electron transfer flavoprotein, beta-subunit, conserved site (InterPro:IPR000049), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730); Has 6473 Blast hits to 6473 proteins in 1645 species: Archae - 150; Bacteria - 3948; Metazoa - 143; Fungi - 135; Plants - 49; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink).
    NP_001078699.1
    • electron transfer flavoprotein beta (ETFBETA); FUNCTIONS IN: electron carrier activity; INVOLVED IN: chlorophyll catabolic process, leucine catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, beta-subunit, conserved site (InterPro:IPR000049), Electron transfer flavoprotein, beta subunit (InterPro:IPR012255), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730); Has 6953 Blast hits to 6953 proteins in 1650 species: Archae - 156; Bacteria - 4220; Metazoa - 148; Fungi - 127; Plants - 47; Viruses - 0; Other Eukaryotes - 2255 (source: NCBI BLink).
    NP_199156.1
    • electron transfer flavoprotein beta (ETFBETA); FUNCTIONS IN: electron carrier activity; INVOLVED IN: chlorophyll catabolic process, leucine catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730), Electron transfer flavoprotein, beta-subunit, conserved site (InterPro:IPR000049), Electron transfer flavoprotein, beta subunit (InterPro:IPR012255); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      17453517..17455297
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344482.1 → NP_001332757.1  electron transfer flavoprotein beta [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFE9, A0A1R7T3K7
    2. NM_123709.4 → NP_199156.1  electron transfer flavoprotein beta [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199156.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A8MRD3, Q2V317, Q8LFE0, Q9LSW8
      UniProtKB/TrEMBL
      A0A178UFE9
      Conserved Domains (1) summary
      COG2086
      Location:1 → 248
      FixA; Electron transfer flavoprotein, alpha and beta subunits [Energy production and conversion]
    3. NM_001085230.2 → NP_001078699.1  electron transfer flavoprotein beta [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078699.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9DH42
      Conserved Domains (1) summary
      COG2086
      Location:1 → 216
      FixA; Electron transfer flavoprotein, alpha and beta subunits [Energy production and conversion]
    4. NM_001036925.2 → NP_001032002.1  electron transfer flavoprotein beta [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001032002.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9DG90
      Conserved Domains (1) summary
      COG2086
      Location:1 → 177
      FixA; Electron transfer flavoprotein, alpha and beta subunits [Energy production and conversion]
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