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    LOC111298108 1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic-like [ Durio zibethinus ]

    Gene ID: 111298108, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111298108
    Gene description
    1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Durio zibethinus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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    Genomic context

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    See LOC111298108 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current Duzib1.0 (GCF_002303985.1) Unplaced Scaffold NW_019168496.1 (64447..66073)

    NW_019168496.1Genomic Context describing neighboring genes Neighboring gene 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic-like Neighboring gene 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic-like Neighboring gene 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic-like Neighboring gene uncharacterized LOC111298110

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019168496 Unplaced Scaffold Reference Duzib1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1,4-alpha-glucan branching enzyme activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in starch metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Durio zibethinus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Duzib1.0

    Genomic

    1. NW_019168496.1 Reference Duzib1.0

      Range
      64447..66073
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022892767.1 → XP_022748502.1  1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic-like

      UniProtKB/TrEMBL
      A0A6P5Z7H3
      Conserved Domains (1) summary
      cl25948
      Location:22 → 102
      PulA; Pullulanase/glycogen debranching enzyme [Carbohydrate transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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