U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    1700031F05Rik RIKEN cDNA 1700031F05 gene [ Mus musculus (house mouse) ]

    Gene ID: 73300, updated on 27-Nov-2024

    Summary

    Official Symbol
    1700031F05Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700031F05 geneprovided by MGI
    Primary source
    MGI:MGI:1920550
    See related
    Ensembl:ENSMUSG00000032894 AllianceGenome:MGI:1920550
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 1.7) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See 1700031F05Rik in Genome Data Viewer
    Location:
    X D; X 45.76 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (101902792..101909959, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (102859186..102866353, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene DMRT-like family pseudogene Neighboring gene DMRT-like family C1c2 Neighboring gene STARR-seq mESC enhancer starr_47679 Neighboring gene predicted pseudogene 9133 Neighboring gene DMRT-like family C1a Neighboring gene family with sequence similarity 236, member E

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC73300

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028496.1NP_082772.1  uncharacterized protein LOC73300

      See identical proteins and their annotated locations for NP_082772.1

      Status: VALIDATED

      Source sequence(s)
      AL773565
      Consensus CDS
      CCDS53160.1
      UniProtKB/TrEMBL
      B1AX30, Q9D9Q8
      Related
      ENSMUSP00000044360.7, ENSMUST00000048061.13

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      101902792..101909959 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006528312.3XP_006528375.1  uncharacterized protein LOC73300 isoform X1

      UniProtKB/TrEMBL
      Q9D9Q8