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    LOC102233212 parathyroid hormone-related protein-like [ Xiphophorus maculatus (southern platyfish) ]

    Gene ID: 102233212, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC102233212
    Gene description
    parathyroid hormone-related protein-like
    See related
    Ensembl:ENSXMAG00000016979
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xiphophorus maculatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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    Genomic context

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    See LOC102233212 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current X_maculatus-5.0-male (GCF_002775205.1) 2 NC_036444.1 (21051456..21054778)
    101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372187.1 (3240503..3241551)

    Chromosome 2 - NC_036444.1Genomic Context describing neighboring genes Neighboring gene lactate dehydrogenase B Neighboring gene thymopoietin a Neighboring gene galanin receptor type 2-like Neighboring gene shaker-related potassium channel tsha2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peptide hormone receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in bone mineralization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in osteoblast development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of chondrocyte differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    parathyroid hormone-related protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference X_maculatus-5.0-male Primary Assembly

    Genomic

    1. NC_036444.1 Reference X_maculatus-5.0-male Primary Assembly

      Range
      21051456..21054778
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005796396.2 → XP_005796453.1  parathyroid hormone-related protein-like

      UniProtKB/TrEMBL
      M4ARB9
      Related
      ENSXMAP00000017014.1, ENSXMAT00000017038.2
      Conserved Domains (1) summary
      pfam01279
      Location:35 → 140
      Parathyroid; Parathyroid hormone family
    Nucleotide Protein Strain
    Heading Accession and Version

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