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    LOC106171162 low affinity immunoglobulin epsilon Fc receptor [ Lingula anatina ]

    Gene ID: 106171162, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC106171162
    Gene description
    low affinity immunoglobulin epsilon Fc receptor
    See related
    EnsemblRapid:LOC106171162
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lingula anatina
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Brachiopoda; Linguliformea; Lingulata; Lingulida; Linguloidea; Lingulidae; Lingula
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    Genomic context

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    See LOC106171162 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current LinAna2.0 (GCF_001039355.2) Unplaced Scaffold NW_019775802.1 (712658..743400)
    100 previous assembly LinAna1.0 (GCF_001039355.1) Unplaced Scaffold NW_013579555.1 (712658..743400)

    NW_019775802.1Genomic Context describing neighboring genes Neighboring gene gamma-butyrobetaine dioxygenase Neighboring gene stomatin-like protein 2, mitochondrial Neighboring gene dynein assembly factor 4, axonemal Neighboring gene probable ATP-dependent RNA helicase YTHDC2 Neighboring gene CD209 antigen-like Neighboring gene histone H3.v1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Lingula genome provides insights into brachiopod evolution and the origin of phosphate biomineralization. Luo YJ, et al. Nat Commun, 2015 Sep 18. PMID 26383154, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    low affinity immunoglobulin epsilon Fc receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lingula anatina Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference LinAna2.0 Primary Assembly

    Genomic

    1. NW_019775802.1 Reference LinAna2.0 Primary Assembly

      Range
      712658..743400
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013551337.1 → XP_013406791.1  low affinity immunoglobulin epsilon Fc receptor

      UniProtKB/TrEMBL
      A0A1S3JA86
      Related
      XP_013406791.1, XM_013551337.1
      Conserved Domains (1) summary
      cd00037
      Location:252 → 375
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    2. XM_013551340.1 → XP_013406794.1  low affinity immunoglobulin epsilon Fc receptor

      UniProtKB/TrEMBL
      A0A1S3JA86
      Related
      XP_013406794.1, XM_013551340.1
      Conserved Domains (1) summary
      cd00037
      Location:252 → 375
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    3. XM_013551333.1 → XP_013406787.1  low affinity immunoglobulin epsilon Fc receptor

      UniProtKB/TrEMBL
      A0A1S3JA86
      Related
      XP_013406787.1, XM_013551333.1
      Conserved Domains (1) summary
      cd00037
      Location:252 → 375
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    4. XM_013551334.1 → XP_013406788.1  low affinity immunoglobulin epsilon Fc receptor

      UniProtKB/TrEMBL
      A0A1S3JA86
      Related
      XP_013406788.1, XM_013551334.1
      Conserved Domains (1) summary
      cd00037
      Location:252 → 375
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    5. XM_013551331.2 → XP_013406785.1  low affinity immunoglobulin epsilon Fc receptor

      UniProtKB/TrEMBL
      A0A1S3JA86
      Related
      XP_013406785.1, XM_013551331.2
      Conserved Domains (1) summary
      cd00037
      Location:252 → 375
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    6. XM_013551339.1 → XP_013406793.1  low affinity immunoglobulin epsilon Fc receptor

      UniProtKB/TrEMBL
      A0A1S3JA86
      Related
      XP_013406793.1, XM_013551339.1
      Conserved Domains (1) summary
      cd00037
      Location:252 → 375
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    7. XM_013551336.1 → XP_013406790.1  low affinity immunoglobulin epsilon Fc receptor

      UniProtKB/TrEMBL
      A0A1S3JA86
      Related
      XP_013406790.1, XM_013551336.1
      Conserved Domains (1) summary
      cd00037
      Location:252 → 375
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    8. XM_013551332.2 → XP_013406786.1  low affinity immunoglobulin epsilon Fc receptor

      UniProtKB/TrEMBL
      A0A1S3JA86
      Related
      XP_013406786.1, XM_013551332.2
      Conserved Domains (1) summary
      cd00037
      Location:252 → 375
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    9. XM_013551341.2 → XP_013406795.1  low affinity immunoglobulin epsilon Fc receptor

      UniProtKB/TrEMBL
      A0A1S3JA86
      Related
      XP_013406795.1, XM_013551341.2
      Conserved Domains (1) summary
      cd00037
      Location:252 → 375
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    10. XM_013551338.1 → XP_013406792.1  low affinity immunoglobulin epsilon Fc receptor

      UniProtKB/TrEMBL
      A0A1S3JA86
      Related
      XP_013406792.1, XM_013551338.1
      Conserved Domains (1) summary
      cd00037
      Location:252 → 375
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    Nucleotide Protein
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