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    CNN01730 cystathionine gamma-lyase, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

    Gene ID: 3255532, updated on 17-May-2024

    Summary

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    Gene symbol
    CNN01730
    Gene description
    cystathionine gamma-lyase, putative
    Locus tag
    CNN01730
    See related
    FungiDB:CNN01730; VEuPathDB:CNN01730
    Gene type
    protein coding
    RNA name
    cystathionine gamma-lyase, putative
    RefSeq status
    PROVISIONAL
    Organism
    Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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    Genomic context

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    See CNN01730 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    5
    Sequence:
    Chromosome: 14; NC_006683.1 (499053..501115, complement)

    Chromosome 14 - NC_006683.1Genomic Context describing neighboring genes Neighboring gene mRNA processing-related protein, putative Neighboring gene 60s ribosomal protein l17, putative Neighboring gene expressed protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006683.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cystathionine gamma-lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cysteine biosynthetic process via cystathionine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transsulfuration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cystathionine gamma-lyase, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006683.1 Reference assembly

      Range
      499053..501115 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_568668.2 → XP_568668.1  cystathionine gamma-lyase, putative [Cryptococcus neoformans var. neoformans JEC21]

      See identical proteins and their annotated locations for XP_568668.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A225XCR9, Q55HF1, Q5K6Y9
      Conserved Domains (2) summary
      PRK08776
      Location:7 → 462
      PRK08776; cystathionine gamma-synthase; Provisional
      cl18945
      Location:7 → 462
      AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    Nucleotide Protein
    Heading Accession and Version

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