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    LOC102446911 olfactory receptor 5F1-like [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

    Gene ID: 102446911, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC102446911
    Gene description
    olfactory receptor 5F1-like
    See related
    Ensembl:ENSPSIG00000000132
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pelodiscus sinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
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    Genomic context

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    See LOC102446911 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005853513.1 (147312..156522)

    NW_005853513.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 5F1-like Neighboring gene olfactory receptor 5F1-like Neighboring gene olfactory receptor 1044-like Neighboring gene olfactory receptor 2B2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005853513 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    olfactory receptor 5F1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PelSin_1.0 Primary Assembly

    Genomic

    1. NW_005853513.1 Reference PelSin_1.0 Primary Assembly

      Range
      147312..156522
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025181600.1 → XP_025037385.1  olfactory receptor 5F1-like isoform X2

      UniProtKB/TrEMBL
      K7EWH2
      Conserved Domains (1) summary
      cd15411
      Location:25 → 303
      7tmA_OR8H-like; olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

    2. XM_006116942.2 → XP_006117004.1  olfactory receptor 5F1-like isoform X1

      UniProtKB/TrEMBL
      K7EWH2
      Related
      ENSPSIP00000000132.1, ENSPSIT00000000132.1
      Conserved Domains (2) summary
      pfam00001
      Location:41 → 290
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:31 → 305
      7tm_4; Olfactory receptor
    Nucleotide Protein
    Heading Accession and Version

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