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    golga2 golgin A2 [ Oreochromis niloticus (Nile tilapia) ]

    Gene ID: 100708701, updated on 8-Mar-2024

    Summary

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    Gene symbol
    golga2
    Gene description
    golgin A2
    See related
    Ensembl:ENSONIG00000002830
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oreochromis niloticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
    Orthologs
    human zebrafish all
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    Genomic context

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    See golga2 in Genome Data Viewer
    Location:
    chromosome: LG7
    Exon count:
    28
    Annotation release Status Assembly LG Location
    104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG7 NC_031972.2 (20390201..20407863)
    103 previous assembly ASM185804v2 (GCF_001858045.1) LG7 NC_031972.1 (20489208..20506863)

    Linkage Group LG7 - NC_031972.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102081320 Neighboring gene endoplasmic reticulum chaperone BiP Neighboring gene dynamin 1a Neighboring gene uncharacterized LOC102081667 Neighboring gene cdkn1a interacting zinc finger protein 1a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi cis cisterna IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi cisterna membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cis-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    golgin subfamily A member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference O_niloticus_UMD_NMBU Primary Assembly

    Genomic

    1. NC_031972.2 Reference O_niloticus_UMD_NMBU Primary Assembly

      Range
      20390201..20407863
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005470347.3 → XP_005470404.1  golgin subfamily A member 2 isoform X1

      UniProtKB/TrEMBL
      I3J3V7
      Related
      ENSONIP00000003547.2, ENSONIT00000003548.2
      Conserved Domains (2) summary
      pfam15070
      Location:418 → 1100
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
      cl12013
      Location:191 → 299
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    2. XM_005470349.3 → XP_005470406.1  golgin subfamily A member 2 isoform X3

      UniProtKB/TrEMBL
      A0A669AY72
      Related
      ENSONIP00000027333.1, ENSONIT00000059309.1
      Conserved Domains (1) summary
      pfam15070
      Location:391 → 1073
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

    3. XM_025908952.1 → XP_025764737.1  golgin subfamily A member 2 isoform X4

      UniProtKB/TrEMBL
      A0A669DNX8
      Related
      ENSONIP00000060116.1, ENSONIT00000052095.1
      Conserved Domains (2) summary
      pfam15070
      Location:366 → 1048
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
      cl25732
      Location:94 → 429
      SMC_N; RecF/RecN/SMC N terminal domain

    4. XM_005470348.3 → XP_005470405.1  golgin subfamily A member 2 isoform X2

      UniProtKB/TrEMBL
      I3J3V8
      Related
      ENSONIP00000003548.2, ENSONIT00000003549.2
      Conserved Domains (2) summary
      pfam15070
      Location:395 → 1077
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
      cl12013
      Location:168 → 276
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    5. XM_005470350.3 → XP_005470407.1  golgin subfamily A member 2 isoform X5

      UniProtKB/TrEMBL
      A0A669CJ53
      Related
      ENSONIP00000046816.1, ENSONIT00000079279.1
      Conserved Domains (2) summary
      pfam15070
      Location:343 → 1025
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
      cl12013
      Location:116 → 224
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    Nucleotide Protein
    Heading Accession and Version

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