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    kcnip2 potassium voltage-gated channel interacting protein 2 [ Oreochromis niloticus (Nile tilapia) ]

    Gene ID: 100709045, updated on 8-Mar-2024

    Summary

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    Gene symbol
    kcnip2
    Gene description
    potassium voltage-gated channel interacting protein 2
    See related
    Ensembl:ENSONIG00000009494
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oreochromis niloticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
    Orthologs
    zebrafish all
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    Genomic context

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    See kcnip2 in Genome Data Viewer
    Location:
    chromosome: LG13
    Exon count:
    13
    Annotation release Status Assembly LG Location
    104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG13 NC_031978.2 (18600148..18706794, complement)
    103 previous assembly ASM185804v2 (GCF_001858045.1) LG13 NC_031978.1 (10682866..10789046, complement)

    Linkage Group LG13 - NC_031978.2Genomic Context describing neighboring genes Neighboring gene canalicular multispecific organic anion transporter 1 Neighboring gene cutC copper transporter homolog (E. coli) Neighboring gene cytochrome c oxidase assembly homolog 15 (yeast) Neighboring gene uncharacterized LOC112842052 Neighboring gene uncharacterized LOC112842051

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables potassium channel regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of voltage-gated potassium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Kv channel-interacting protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference O_niloticus_UMD_NMBU Primary Assembly

    Genomic

    1. NC_031978.2 Reference O_niloticus_UMD_NMBU Primary Assembly

      Range
      18600148..18706794 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025897818.1 → XP_025753603.1  Kv channel-interacting protein 2 isoform X3

      UniProtKB/TrEMBL
      I3JST5
      Conserved Domains (1) summary
      COG5126
      Location:83 → 242
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    2. XM_025897819.1 → XP_025753604.1  Kv channel-interacting protein 2 isoform X7

      UniProtKB/TrEMBL
      A0A669CC36, A0A669CSP2
      Related
      ENSONIP00000049808.1, ENSONIT00000081738.1
      Conserved Domains (1) summary
      COG5126
      Location:50 → 209
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    3. XM_005474159.3 → XP_005474216.1  Kv channel-interacting protein 2 isoform X3

      UniProtKB/TrEMBL
      I3JST5
      Related
      ENSONIP00000011930.1, ENSONIT00000011939.2
      Conserved Domains (1) summary
      COG5126
      Location:83 → 242
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    4. XM_025897817.1 → XP_025753602.1  Kv channel-interacting protein 2 isoform X2

      Conserved Domains (1) summary
      COG5126
      Location:88 → 247
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    5. XM_005474162.3 → XP_005474219.1  Kv channel-interacting protein 2 isoform X6

      See identical proteins and their annotated locations for XP_005474219.1

      UniProtKB/TrEMBL
      A0A669AYQ5, A0A669CC36
      Related
      ENSONIP00000028240.1, ENSONIT00000053241.1
      Conserved Domains (1) summary
      COG5126
      Location:55 → 214
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    6. XM_005474161.4 → XP_005474218.1  Kv channel-interacting protein 2 isoform X5

      See identical proteins and their annotated locations for XP_005474218.1

      UniProtKB/TrEMBL
      A0A669C9V8, A0A669CC36
      Related
      ENSONIP00000044945.1, ENSONIT00000036893.1
      Conserved Domains (1) summary
      COG5126
      Location:61 → 220
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    7. XM_025897816.1 → XP_025753601.1  Kv channel-interacting protein 2 isoform X1

      UniProtKB/TrEMBL
      I3JST6
      Conserved Domains (1) summary
      COG5126
      Location:100 → 259
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    8. XM_003441086.5 → XP_003441134.1  Kv channel-interacting protein 2 isoform X4

      See identical proteins and their annotated locations for XP_003441134.1

      UniProtKB/TrEMBL
      I3JST6
      Related
      ENSONIP00000009615.2, ENSONIT00000009621.2
      Conserved Domains (1) summary
      COG5126
      Location:67 → 226
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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