U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    SLITRK2 SLIT and NTRK like family member 2 [ Macaca fascicularis (crab-eating macaque) ]

    Gene ID: 102128306, updated on 7-Jun-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    SLITRK2
    Gene description
    SLIT and NTRK like family member 2
    See related
    Ensembl:ENSMFAG00000030304
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca fascicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SLITRK2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) X NC_088395.1 (151903375..151911341)
    102 previous assembly MFA1912RKSv2 (GCF_012559485.2) X NC_052275.1 (139860655..139868617)

    Chromosome X - NC_088395.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase A Neighboring gene uncharacterized LOC135969074 Neighboring gene large ribosomal subunit protein uL30-like Neighboring gene uncharacterized protein CXorf51A

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axonogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of synapse assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of presynapse assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in glutamatergic synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    SLIT and NTRK-like protein 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T2T-MFA8v1.0

    Genomic

    1. NC_088395.1 Reference T2T-MFA8v1.0

      Range
      151903375..151911341
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015444230.3 → XP_015299716.2  SLIT and NTRK-like protein 2

    2. XM_045384466.2 → XP_045240401.2  SLIT and NTRK-like protein 2

    3. XM_015444229.3 → XP_015299715.2  SLIT and NTRK-like protein 2

    4. XM_015444231.3 → XP_015299717.2  SLIT and NTRK-like protein 2

    5. XM_045384467.2 → XP_045240402.2  SLIT and NTRK-like protein 2

    6. XM_005594753.4 → XP_005594810.2  SLIT and NTRK-like protein 2

    7. XM_005594755.4 → XP_005594812.2  SLIT and NTRK-like protein 2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.