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    4930594C11Rik RIKEN cDNA 4930594C11 gene [ Mus musculus (house mouse) ]

    Gene ID: 77633, updated on 17-Aug-2024

    Summary

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    Official Symbol
    4930594C11Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4930594C11 geneprovided by MGI
    Primary source
    MGI:MGI:1924883
    See related
    Ensembl:ENSMUSG00000103948 AllianceGenome:MGI:1924883
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See 4930594C11Rik in Genome Data Viewer
    Location:
    1 B; 1 15.46 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (37524932..37527686, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (37485851..37488605, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene cytochrome C oxidase assembly factor 5 Neighboring gene unc-50 homolog Neighboring gene mannoside acetylglucosaminyltransferase 4, isoenzyme A Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:37528102-37528303 Neighboring gene STARR-positive B cell enhancer ABC_E1540 Neighboring gene STARR-positive B cell enhancer ABC_E1541 Neighboring gene STARR-seq mESC enhancer starr_00677 Neighboring gene predicted gene, 39627 Neighboring gene STARR-positive B cell enhancer ABC_E5748 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:37642841-37643028 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:37643098-37643207 Neighboring gene RIKEN cDNA 4930556I23 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:37671888-37672102 Neighboring gene capping protein inhibiting regulator of actin like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • G1 to S phase transition pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024017.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC084390
      Related
      ENSMUST00000192316.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      37524932..37527686 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_018447.1: Suppressed sequence

      Description
      NG_018447.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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