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    Plscr1l1 phospholipid scramblase 1 like 1 [ Mus musculus (house mouse) ]

    Gene ID: 78459, updated on 27-Nov-2024

    Summary

    Official Symbol
    Plscr1l1provided by MGI
    Official Full Name
    phospholipid scramblase 1 like 1provided by MGI
    Primary source
    MGI:MGI:1925709
    See related
    Ensembl:ENSMUSG00000074139 AllianceGenome:MGI:1925709
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700057G04Rik
    Summary
    Predicted to enable phospholipid scramblase activity. Predicted to be involved in plasma membrane phospholipid scrambling. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 18.6) See more
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    Genomic context

    See Plscr1l1 in Genome Data Viewer
    Location:
    9 E3.3; 9 48.36 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (92191379..92239929)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (92309326..92357876)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene phospholipid scramblase 1 Neighboring gene microRNA 6386 Neighboring gene phospholipid scramblase 2 Neighboring gene STARR-seq mESC enhancer starr_24898 Neighboring gene predicted gene 15493 Neighboring gene phospholipid scramblase 4 Neighboring gene STARR-seq mESC enhancer starr_24899 Neighboring gene predicted gene, 25417

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables phospholipid scramblase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in plasma membrane phospholipid scrambling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC78459
    Names
    novel Plsrc protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033184.3NP_001028356.1  uncharacterized protein LOC78459

      See identical proteins and their annotated locations for NP_001028356.1

      Status: PREDICTED

      Source sequence(s)
      AC111125, CT009720
      Consensus CDS
      CCDS23406.1
      UniProtKB/TrEMBL
      Q3V0U0
      Related
      ENSMUSP00000096077.2, ENSMUST00000098477.8
      Conserved Domains (1) summary
      cl02043
      Location:9222
      LOR; LURP-one-related

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      92191379..92239929
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011242838.2XP_011241140.1  uncharacterized protein LOC78459 isoform X2

      See identical proteins and their annotated locations for XP_011241140.1

      Conserved Domains (1) summary
      cl02043
      Location:1199
      LOR; LURP-one-related
    2. XM_011242837.2XP_011241139.1  uncharacterized protein LOC78459 isoform X1

      See identical proteins and their annotated locations for XP_011241139.1

      UniProtKB/TrEMBL
      Q3V0U0
      Conserved Domains (1) summary
      cl02043
      Location:9222
      LOR; LURP-one-related
    3. XM_011242839.1XP_011241141.1  uncharacterized protein LOC78459 isoform X2

      See identical proteins and their annotated locations for XP_011241141.1

      Conserved Domains (1) summary
      cl02043
      Location:1199
      LOR; LURP-one-related

    RNA

    1. XR_001779073.1 RNA Sequence