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    hck HCK proto-oncogene, Src family tyrosine kinase [ Carassius auratus (goldfish) ]

    Gene ID: 113041145, updated on 11-Apr-2024

    Summary

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    Gene symbol
    hck
    Gene description
    HCK proto-oncogene, Src family tyrosine kinase
    See related
    Ensembl:ENSCARG00000018406
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Carassius auratus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
    Orthologs
    human zebrafish all
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    Genomic context

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    See hck in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current ASM336829v1 (GCF_003368295.1) 23 NC_039265.1 (7400058..7413572, complement)

    Chromosome 23 - NC_039265.1Genomic Context describing neighboring genes Neighboring gene pleiomorphic adenoma gene-like 2 Neighboring gene transmembrane 9 superfamily protein member 4 Neighboring gene RBBP8 N-terminal-like protein Neighboring gene transcription factor GATA-5-like Neighboring gene uncharacterized LOC113041147

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_039265.1 Chromosome 23 Reference ASM336829v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables non-membrane spanning protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extrinsic component of cytoplasmic side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tyrosine-protein kinase HCK-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM336829v1 Primary Assembly

    Genomic

    1. NC_039265.1 Reference ASM336829v1 Primary Assembly

      Range
      7400058..7413572 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026199510.1 → XP_026055295.1  tyrosine-protein kinase HCK-like

      UniProtKB/TrEMBL
      A0A6P6J4U7
      Related
      ENSCARP00000051685.1, ENSCART00000053978.1

    2. XM_026199508.1 → XP_026055293.1  tyrosine-protein kinase HCK-like

      UniProtKB/TrEMBL
      A0A6P6J4U7

    3. XM_026199511.1 → XP_026055296.1  tyrosine-protein kinase HCK-like

      UniProtKB/TrEMBL
      A0A6P6J4U7
    Nucleotide Protein Strain
    Heading Accession and Version

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