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    scel.L sciellin L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 444250, updated on 4-Jan-2025

    Summary

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    Official Symbol
    scel.L
    Official Full Name
    sciellin L homeolog
    Primary source
    Xenbase:XB-GENE-998746
    Locus tag
    XELAEV_18013182mg
    See related
    EnsemblRapid:ENSXLAG00005000628 AllianceGenome:Xenbase:XB-GENE-998746
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    scel
    Summary
    Predicted to enable metal ion binding activity. Orthologous to human SCEL (sciellin). [provided by Alliance of Genome Resources, Jan 2025]
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See scel.L in Genome Data Viewer
    Location:
    chromosome: 2L
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (131560107..131622249, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (125681234..125743531, complement)

    Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene endothelin receptor type B L homeolog Neighboring gene SLAIN motif family member 1 L homeolog Neighboring gene MYC binding protein 2, E3 ubiquitin protein ligase L homeolog Neighboring gene autotransporter adhesin BpaC-like Neighboring gene F-box and leucine-rich repeat protein 3 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC80840

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    sciellin L homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001092354.1 → NP_001085823.1  sciellin L homeolog

      See identical proteins and their annotated locations for NP_001085823.1

      Status: PROVISIONAL

      Source sequence(s)
      BC073393
      UniProtKB/TrEMBL
      A0A974DR77, Q6GNV8
      Related
      ENSXLAP00005001792.1, ENSXLAT00005001833.1
      Conserved Domains (1) summary
      smart00132
      Location:596 → 654
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      131560107..131622249 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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