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    CERT1 ceramide transporter 1 [ Lagenorhynchus obliquidens (Pacific white-sided dolphin) ]

    Gene ID: 113617419, updated on 15-Mar-2024

    Summary

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    Gene symbol
    CERT1
    Gene description
    ceramide transporter 1
    See related
    EnsemblRapid:ENSLOBG00000002711
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lagenorhynchus obliquidens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Lagenorhynchus
    Also known as
    COL4A3BP
    Orthologs
    human mouse all
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    Genomic context

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    See CERT1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current ASM367639v1 (GCF_003676395.1) Unplaced Scaffold NW_020837948.1 (58186608..58315602)

    NW_020837948.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113617416 Neighboring gene ankyrin repeat and death domain containing 1B Neighboring gene DNA polymerase kappa Neighboring gene 3-hydroxy-3-methylglutaryl-CoA reductase Neighboring gene ankyrin repeat domain 31

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020837948 Unplaced Scaffold Reference ASM367639v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-4-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ER to Golgi ceramide transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    collagen type IV alpha-3-binding protein
    Names
    collagen type IV alpha 3 binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lagenorhynchus obliquidens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM367639v1 Primary Assembly

    Genomic

    1. NW_020837948.1 Reference ASM367639v1 Primary Assembly

      Range
      58186608..58315602
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027100810.1 → XP_026956611.1  collagen type IV alpha-3-binding protein isoform X3

      Related
      ENSLOBP00000003436.1, ENSLOBT00000003871.1
      Conserved Domains (2) summary
      cd08872
      Location:522 → 755
      START_STARD11-like; Ceramide-binding START domain of mammalian STARD11 and related domains
      cd13283
      Location:157 → 256
      PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain

    2. XM_027100808.1 → XP_026956609.1  collagen type IV alpha-3-binding protein isoform X1

      Related
      ENSLOBP00000003489.1, ENSLOBT00000003925.1
      Conserved Domains (2) summary
      cd08872
      Location:391 → 624
      START_STARD11-like; Ceramide-binding START domain of mammalian STARD11 and related domains
      cd13283
      Location:26 → 125
      PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain

    3. XM_027100809.1 → XP_026956610.1  collagen type IV alpha-3-binding protein isoform X2

      Related
      ENSLOBP00000003538.1, ENSLOBT00000003979.1
      Conserved Domains (2) summary
      cd08872
      Location:364 → 598
      START_STARD11-like; Ceramide-binding START domain of mammalian STARD11 and related domains
      cd13283
      Location:26 → 125
      PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain
    Nucleotide Protein
    Heading Accession and Version

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