U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    HCAG_04315 hypothetical protein [ Histoplasma mississippiense (nom. inval.) ]

    Gene ID: 5447253, updated on 17-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    HCAG_04315
    Gene description
    hypothetical protein
    Locus tag
    HCAG_04315
    See related
    FungiDB:HCAG_04315; VEuPathDB:HCAG_04315
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Histoplasma mississippiense (nom. inval.) (strain: NAm1)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma; unclassified Histoplasma
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See HCAG_04315 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_001813979.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_001813979.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in vacuolar proton-transporting V-type ATPase complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001813979.1 Reference assembly

      Range
      970777..971772
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001540425.1 → XP_001540475.1  predicted protein [Histoplasma mississippiense (nom. inval.)]

      See identical proteins and their annotated locations for XP_001540475.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A6R3V7
      Conserved Domains (1) summary
      pfam09446
      Location:34 → 88
      VMA21; VMA21-like domain
    Protein Accession Links
    GenPept Link UniProtKB Link
    EDN07805.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials