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    SS1G_13922 hypothetical protein [ Sclerotinia sclerotiorum 1980 UF-70 ]

    Gene ID: 5481200, updated on 16-Nov-2023

    Summary

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    Gene symbol
    SS1G_13922
    Gene description
    hypothetical protein
    Locus tag
    SS1G_13922
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
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    Genomic context

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    See SS1G_13922 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_001820808.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001820808.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tripeptidyl-peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001820808.1 Reference assembly

      Range
      87345..89372
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001585012.1 → XP_001585062.1  hypothetical protein SS1G_13922 [Sclerotinia sclerotiorum 1980 UF-70]

      See identical proteins and their annotated locations for XP_001585062.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1D9QFU7, A7F8J1
      Conserved Domains (2) summary
      cd04056
      Location:224 → 605
      Peptidases_S53; Peptidase domain in the S53 family
      pfam09286
      Location:38 → 180
      Pro-kuma_activ; Pro-kumamolisin, activation domain
    Nucleotide Protein
    Heading Accession and Version

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