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    SS1G_13931 hypothetical protein [ Sclerotinia sclerotiorum 1980 UF-70 ]

    Gene ID: 5481202, updated on 16-Nov-2023

    Summary

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    Gene symbol
    SS1G_13931
    Gene description
    hypothetical protein
    Locus tag
    SS1G_13931
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
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    Genomic context

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    See SS1G_13931 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    7

    NW_001820808.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001820808.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphorelay sensor kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001820808.1 Reference assembly

      Range
      108911..112800 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001585021.1 → XP_001585071.1  hypothetical protein SS1G_13931 [Sclerotinia sclerotiorum 1980 UF-70]

      See identical proteins and their annotated locations for XP_001585071.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1D9QFY0, A7F8K0
      Conserved Domains (2) summary
      COG0642
      Location:371 → 552
      BaeS; Signal transduction histidine kinase [Signal transduction mechanisms]
      pfam13426
      Location:247 → 362
      PAS_9; PAS domain
    Nucleotide Protein
    Heading Accession and Version

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