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    Cpap3-d cuticular protein analogous to peritrophins 3-D [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100124078, updated on 5-Oct-2024

    Summary

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    Gene symbol
    Cpap3-d
    Gene description
    cuticular protein analogous to peritrophins 3-D
    See related
    NASONIABASE:NV10387
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    Also known as
    Cpap3-d1
    Orthologs
    honey bee all
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    Genomic context

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    See Cpap3-d in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 5 Unlocalized Scaffold NC_045761.1 (9712160..9714929, complement)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 5 Unlocalized Scaffold NW_022279650.1 (9712160..9714929, complement)

    Chromosome 5 - NC_045761.1Genomic Context describing neighboring genes Neighboring gene putative cuticle collagen 145 Neighboring gene odorant receptor 286 Neighboring gene cuticular protein analogous to peritrophins 3-D2 Neighboring gene cuticular protein analogous to peritrophins 3-A2 Neighboring gene cuticular protein analogous to peritrophins 3-A1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genes encoding proteins with peritrophin A-type chitin-binding domains in Tribolium castaneum are grouped into three distinct families based on phylogeny, expression and function. Jasrapuria S, et al. Insect Biochem Mol Biol, 2010 Mar. PMID 20144715
    2. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cuticular protein analogous to peritrophins 3-D
    Names
    cuticular protein analogous to peritrophins 3-D1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001172383.1 → NP_001165854.1  cuticular protein analogous to peritrophins 3-D precursor

      Status: VALIDATED

      Source sequence(s)
      ES633196, ES644762, EV431724, EV434054
      UniProtKB/TrEMBL
      A0A7M6UP44
      Conserved Domains (1) summary
      pfam01607
      Location:110 → 154
      CBM_14; Chitin binding Peritrophin-A domain

    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045761.1 Reference Nvit_psr_1.1

      Range
      9712160..9714929 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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