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    WASH7P WASP family homolog 7, pseudogene [ Homo sapiens (human) ]

    Gene ID: 653635, updated on 22-Oct-2024

    Summary

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    Official Symbol
    WASH7Pprovided by HGNC
    Official Full Name
    WASP family homolog 7, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:38034
    See related
    Ensembl:ENSG00000310526 AllianceGenome:HGNC:38034
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FAM39F; WASH5P
    Expression
    Ubiquitous expression in spleen (RPKM 40.8), skin (RPKM 39.5) and 25 other tissues See more
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    Genomic context

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    See WASH7P in Genome Data Viewer
    Location:
    1p36.33
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (14362..29370, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (14362..29370, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene DEAD/H-box helicase 11 like 1 (pseudogene) Neighboring gene microRNA 6859-1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:20498-21346 Neighboring gene MIR1302-2 host gene Neighboring gene microRNA 1302-2 Neighboring gene family with sequence similarity 138 member A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. Human subtelomeric WASH genes encode a new subclass of the WASP family. Linardopoulou EV, et al. PLoS Genet, 2007 Dec. PMID 18159949, Free PMC Article
    2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article
    3. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Other Names

    • WAS protein family homolog 5 pseudogene
    • WAS protein family homolog 7, pseudogene
    • family with sequence similarity 39, member F

    Clone Names

    • FLJ35264, FLJ50976, FLJ51139, FLJ99967

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024540.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK310121, AK310139, AL627309, BU616084, DA054875, DA143319
      Related
      ENST00000831146.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      14362..29370 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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