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    LOC108927659 E3 ubiquitin-protein ligase MSL2-like [ Scleropages formosus (Asian bonytongue) ]

    Gene ID: 108927659, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC108927659
    Gene description
    E3 ubiquitin-protein ligase MSL2-like
    See related
    Ensembl:ENSSFOG00015006855
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Scleropages formosus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
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    Genomic context

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    See LOC108927659 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current fSclFor1.1 (GCF_900964775.1) 19 NC_041824.1 (1023009..1027898)
    100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371593.1 (1047721..1050393)

    Chromosome 19 - NC_041824.1Genomic Context describing neighboring genes Neighboring gene disco-interacting protein 2 homolog C Neighboring gene cohesin subunit SA-1-like Neighboring gene uncharacterized LOC108927652 Neighboring gene tumor necrosis factor ligand superfamily member 10-like Neighboring gene neutral cholesterol ester hydrolase 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of MSL complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase MSL2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSclFor1.1 Primary Assembly

    Genomic

    1. NC_041824.1 Reference fSclFor1.1 Primary Assembly

      Range
      1023009..1027898
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018741074.2 → XP_018596590.1  E3 ubiquitin-protein ligase MSL2-like isoform X1

      UniProtKB/TrEMBL
      A0A0N8JXP2, A0A8C9RE15
      Related
      ENSSFOP00015010538.1, ENSSFOT00015010686.2

    2. XM_018741075.2 → XP_018596591.1  E3 ubiquitin-protein ligase MSL2-like isoform X2

      UniProtKB/TrEMBL
      A0A0N8JXP2
    Nucleotide Protein
    Heading Accession and Version

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