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    LOC107984379 uncharacterized LOC107984379 [ Homo sapiens (human) ]

    Gene ID: 107984379, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC107984379
    Gene description
    uncharacterized LOC107984379
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC107984379 in Genome Data Viewer
    Location:
    11q24.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (127229925..127231863)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (127262951..127264889)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101929473 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:126970468-126970708 Neighboring gene uncharacterized LOC105369562 Neighboring gene long intergenic non-protein coding RNA 2712 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:127180643-127181842 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:127190865-127191395 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_19685 Neighboring gene MPRA-validated peak1506 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:127262370-127262928 Neighboring gene RN7SK pseudogene 121

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      127229925..127231863
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001748080.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      127262951..127264889
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007081826.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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