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    timeout circadian regulator timeout [ Acyrthosiphon pisum (pea aphid) ]

    Gene ID: 100159918, updated on 3-Jul-2024

    Summary

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    Gene symbol
    timeout
    Gene description
    circadian regulator timeout
    See related
    APHIDBASE:ACYPI001257; EnsemblRapid:LOC100159918
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acyrthosiphon pisum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
    Orthologs
    fruit fly all
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    Genomic context

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    See timeout in Genome Data Viewer
    Location:
    chromosome: A1
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (56292101..56301971)
    102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003384299.1 (93573..103420, complement)

    Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene NADPH:adrenodoxin oxidoreductase, mitochondrial Neighboring gene leucine-rich repeat-containing protein 2mit Neighboring gene glutamate--cysteine ligase catalytic subunit Neighboring gene RING-box protein 1A-like Neighboring gene uncharacterized LOC100568808

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA replication checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in replication fork arrest IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of replication fork protection complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein timeless homolog
    Names
    timeless circadian regulator timeout

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Genomic

    1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

      Range
      56292101..56301971
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016807460.2 → XP_016662949.1  protein timeless homolog

      UniProtKB/TrEMBL
      A0A8R2H9U2
      Related
      XP_016662949.1, XM_016807460.2
      Conserved Domains (3) summary
      pfam05029
      Location:729 → 1172
      TIMELESS_C; Timeless protein C terminal region
      pfam04615
      Location:1077 → 1342
      Utp14; Utp14 protein
      pfam04821
      Location:23 → 284
      TIMELESS; Timeless protein

    2. XM_008188524.3 → XP_008186746.1  protein timeless homolog

      UniProtKB/TrEMBL
      A0A8R2H9U2
      Related
      XP_008186746.1, XM_008188524.3
      Conserved Domains (3) summary
      pfam05029
      Location:729 → 1172
      TIMELESS_C; Timeless protein C terminal region
      pfam04615
      Location:1077 → 1342
      Utp14; Utp14 protein
      pfam04821
      Location:23 → 284
      TIMELESS; Timeless protein
    Nucleotide Protein Strain
    Heading Accession and Version

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