U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    LOC101069599 AN1-type zinc finger protein 5-like [ Takifugu rubripes (torafugu) ]

    Gene ID: 101069599, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC101069599
    Gene description
    AN1-type zinc finger protein 5-like
    See related
    Ensembl:ENSTRUG00000011466
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC101069599 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 6 NC_042290.1 (2529857..2535525, complement)
    101 previous assembly FUGU5 (GCF_000180615.1) 6 NC_018895.1 (1383523..1389005, complement)

    Chromosome 6 - NC_042290.1Genomic Context describing neighboring genes Neighboring gene transmembrane channel-like 2a Neighboring gene dynein regulatory complex subunit 7-like Neighboring gene cyclin B1 Neighboring gene uncharacterized LOC115250246

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    AN1-type zinc finger protein 5-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042290.1 Reference fTakRub1.2 Primary Assembly

      Range
      2529857..2535525 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011604466.2 → XP_011602768.2  AN1-type zinc finger protein 5-like isoform X1

      UniProtKB/TrEMBL
      H2TWA0
      Conserved Domains (2) summary
      smart00154
      Location:163 → 200
      ZnF_AN1; AN1-like Zinc finger
      pfam01754
      Location:12 → 35
      zf-A20; A20-like zinc finger

    2. XM_029837765.1 → XP_029693625.1  AN1-type zinc finger protein 5-like isoform X2

      Conserved Domains (2) summary
      smart00154
      Location:133 → 159
      ZnF_AN1; AN1-like Zinc finger
      pfam01754
      Location:12 → 35
      zf-A20; A20-like zinc finger

    3. XM_029837764.1 → XP_029693624.1  AN1-type zinc finger protein 5-like isoform X1

      UniProtKB/TrEMBL
      H2TWA0
      Conserved Domains (2) summary
      smart00154
      Location:163 → 200
      ZnF_AN1; AN1-like Zinc finger
      pfam01754
      Location:12 → 35
      zf-A20; A20-like zinc finger

    4. XM_011604465.2 → XP_011602767.2  AN1-type zinc finger protein 5-like isoform X1

      UniProtKB/TrEMBL
      H2TWA0
      Related
      ENSTRUP00000062334.1, ENSTRUT00000084554.1
      Conserved Domains (2) summary
      smart00154
      Location:163 → 200
      ZnF_AN1; AN1-like Zinc finger
      pfam01754
      Location:12 → 35
      zf-A20; A20-like zinc finger
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials