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    RSPRY1 ring finger and SPRY domain containing 1 [ Strigops habroptila (Kakapo) ]

    Gene ID: 115619390, updated on 3-Aug-2024

    Summary

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    Gene symbol
    RSPRY1
    Gene description
    ring finger and SPRY domain containing 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strigops habroptila
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
    Orthologs
    human mouse all
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    Genomic context

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    See RSPRY1 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    101 current bStrHab1.2.pri (GCF_004027225.2) Z NC_044302.2 (22334453..22374932)
    100 previous assembly bStrHab1_v1.p (GCF_004027225.1) Z NC_044302.1 (22334453..22374932)

    Chromosome Z - NC_044302.2Genomic Context describing neighboring genes Neighboring gene copine 2 Neighboring gene uncharacterized LOC115619394 Neighboring gene proteasome activator subunit 3 interacting protein 1 Neighboring gene ARF like GTPase 2 binding protein Neighboring gene plasmolipin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RING finger and SPRY domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bStrHab1.2.pri

    Genomic

    1. NC_044302.2 Reference bStrHab1.2.pri

      Range
      22334453..22374932
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030511540.1 → XP_030367400.1  RING finger and SPRY domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A672TE87, A0A672TI61
      Conserved Domains (2) summary
      cd12883
      Location:358 → 478
      SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain
      cd16566
      Location:524 → 564
      RING-HC_RSPRY1; RING finger, HC subclass, found in RING finger and SPRY domain-containing protein 1 (RSPRY1) and similar proteins

    2. XM_030511541.1 → XP_030367401.1  RING finger and SPRY domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A672TE87, A0A672TI61
      Conserved Domains (2) summary
      cd12883
      Location:358 → 478
      SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain
      cd16566
      Location:524 → 564
      RING-HC_RSPRY1; RING finger, HC subclass, found in RING finger and SPRY domain-containing protein 1 (RSPRY1) and similar proteins

    3. XM_030511538.1 → XP_030367398.1  RING finger and SPRY domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A672TE87
      Conserved Domains (2) summary
      cd12883
      Location:401 → 521
      SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain
      cd16566
      Location:567 → 607
      RING-HC_RSPRY1; RING finger, HC subclass, found in RING finger and SPRY domain-containing protein 1 (RSPRY1) and similar proteins

    4. XM_030511539.1 → XP_030367399.1  RING finger and SPRY domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A672TE87, A0A672TI61
      Conserved Domains (2) summary
      cd12883
      Location:358 → 478
      SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain
      cd16566
      Location:524 → 564
      RING-HC_RSPRY1; RING finger, HC subclass, found in RING finger and SPRY domain-containing protein 1 (RSPRY1) and similar proteins

    5. XM_030511537.1 → XP_030367397.1  RING finger and SPRY domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A672TE87
      Conserved Domains (2) summary
      cd12883
      Location:410 → 530
      SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain
      cd16566
      Location:576 → 616
      RING-HC_RSPRY1; RING finger, HC subclass, found in RING finger and SPRY domain-containing protein 1 (RSPRY1) and similar proteins

    6. XM_030511543.1 → XP_030367403.1  RING finger and SPRY domain-containing protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A672TE87
      Conserved Domains (2) summary
      cd12883
      Location:267 → 387
      SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain
      cd16566
      Location:433 → 473
      RING-HC_RSPRY1; RING finger, HC subclass, found in RING finger and SPRY domain-containing protein 1 (RSPRY1) and similar proteins

    RNA

    1. XR_003994998.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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