snpc-1.1 snRNA-activating protein complex subunit 1 [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: snpc-1.1
Official Full Name: snRNA-activating protein complex subunit 1
Primary source: WormBase:WBGene00015513
Locus tag: CELE_C06A8.2
See related: AllianceGenome:WB:WBGene00015513
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable sequence-specific DNA binding activity. Predicted to be involved in snRNA transcription by RNA polymerase II and snRNA transcription by RNA polymerase III. Predicted to be part of snRNA-activating protein complex. Orthologous to human SNAPC1 (small nuclear RNA activating complex polypeptide 1). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See snpc-1.1 in Genome Data Viewer

Location:: chromosome: II

Exon count:: 9

Sequence:: Chromosome: II; NC_003280.10 (7779297..7781301, complement)

Chromosome II - NC_003280.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

C06A8.2 (e-PCR)
- UniSTS:308953

C06A8.5 (e-PCR)
- UniSTS:308954

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables sequence-specific DNA binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in snRNA transcription by RNA polymerase II	IBA Inferred from Biological aspect of Ancestor more info
involved_in snRNA transcription by RNA polymerase III	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of snRNA-activating protein complex	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: snRNA-activating protein complex subunit 1

NP_495636.2

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003280.10 Reference assembly

Range

7779297..7781301 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_063235.6 → NP_495636.2 snRNA-activating protein complex subunit 1 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_495636.2

Status: REVIEWED

UniProtKB/TrEMBL

Q17694

Conserved Domains (1) summary

pfam09808
Location:15 → 209

SNAPc_SNAP43; Small nuclear RNA activating complex (SNAPc), subunit SNAP43