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    F21A3.3 EGF-like domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 184748, updated on 28-Oct-2024

    Summary

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    Official Symbol
    F21A3.3
    Official Full Name
    EGF-like domain-containing protein
    Primary source
    WormBase:WBGene00008993
    Locus tag
    CELE_F21A3.3
    See related
    AllianceGenome:WB:WBGene00008993
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See F21A3.3 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    8
    Sequence:
    Chromosome: V; NC_003283.11 (15517713..15519681)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Neur_chan_memb domain-containing protein;Neurotransmitter-gated ion-channel transmembrane domain-containing protein Neighboring gene ncRNA Neighboring gene tRNA-Val Neighboring gene tRNA-Met Neighboring gene ncRNA Neighboring gene Serpentine Receptor, class H Neighboring gene Purple acid phosphatase Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    EGF-like domain-containing protein
    NP_506862.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      15517713..15519681
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074461.5 → NP_506862.2  EGF-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506862.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17829
      Conserved Domains (3) summary
      cd07828
      Location:120 → 287
      nitrobindin; nitrobindin heme-binding domain
      cd00054
      Location:27 → 65
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      pfam01549
      Location:67 → 105
      ShK; ShK domain-like
    Nucleotide Protein
    Heading Accession and Version

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