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    T21D12.11 Serine/threonine-protein kinase DDB_G0282963 [ Caenorhabditis elegans ]

    Gene ID: 188694, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T21D12.11
    Official Full Name
    Serine/threonine-protein kinase DDB_G0282963
    Primary source
    WormBase:WBGene00020650
    Locus tag
    CELE_T21D12.11
    See related
    AllianceGenome:WB:WBGene00020650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable kinase activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T21D12.11 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    5
    Sequence:
    Chromosome: IV; NC_003282.8 (269407..272099)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Paralyzed arrest at two-fold protein 6 Neighboring gene BPTI/Kunitz inhibitor domain-containing protein Neighboring gene Serpentine Receptor, class H Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Serine/threonine-protein kinase DDB_G0282963
    NP_499893.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      269407..272099
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067492.1 → NP_499893.1  Serine/threonine-protein kinase DDB_G0282963 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499893.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O16783
      Conserved Domains (1) summary
      PRK11907
      Location:421 → 499
      PRK11907; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
    Nucleotide Protein
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