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    LOC115962198 anthocyanidin 5,3-O-glucosyltransferase-like [ Quercus lobata ]

    Gene ID: 115962198, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC115962198
    Gene description
    anthocyanidin 5,3-O-glucosyltransferase-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Quercus lobata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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    Genomic context

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    See LOC115962198 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current ValleyOak3.0 (GCF_001633185.1) 9 NC_044912.1 (12313803..12315586, complement)

    Chromosome 9 - NC_044912.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 1 Neighboring gene uncharacterized LOC115959390 Neighboring gene protein SGT1 homolog Neighboring gene uncharacterized LOC115961234

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044912.1 Chromosome 9 Reference ValleyOak3.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    anthocyanidin 5,3-O-glucosyltransferase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Quercus lobata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ValleyOak3.0

    Genomic

    1. NC_044912.1 Reference ValleyOak3.0

      Range
      12313803..12315586 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031081095.1 → XP_030936955.1  anthocyanidin 5,3-O-glucosyltransferase-like

      UniProtKB/TrEMBL
      A0A7N2MIB7
      Conserved Domains (1) summary
      cl10013
      Location:2 → 463
      Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
    Nucleotide Protein
    Heading Accession and Version

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