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    LARGE1 LARGE xylosyl- and glucuronyltransferase 1 [ Vicugna pacos (alpaca) ]

    Gene ID: 102534508, updated on 10-Mar-2024

    Summary

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    Gene symbol
    LARGE1
    Gene description
    LARGE xylosyl- and glucuronyltransferase 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vicugna pacos
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
    Orthologs
    human mouse all
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    Genomic context

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    See LARGE1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    102 current VicPac3.1 (GCF_000164845.3) 12 Unlocalized Scaffold NW_021964178.1 (46087186..46582527, complement)
    101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882768.1 (123806..621068, complement)

    NW_021964178.1Genomic Context describing neighboring genes Neighboring gene protein HP-25 homolog 2-like Neighboring gene protein HP-20 homolog Neighboring gene U6atac minor spliceosomal RNA Neighboring gene uncharacterized LOC116282703 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene intestine specific homeobox Neighboring gene HMG-box containing 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glucuronosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables xylosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein O-linked mannosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LARGE xylosyl- and glucuronyltransferase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference VicPac3.1 Primary Assembly

    Genomic

    1. NW_021964178.1 Reference VicPac3.1 Primary Assembly

      Range
      46087186..46582527 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015241567.2 → XP_015097053.1  LARGE xylosyl- and glucuronyltransferase 1

      UniProtKB/TrEMBL
      A0A6J0AN44
      Conserved Domains (2) summary
      cd06431
      Location:218 → 497
      GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
      pfam13896
      Location:553 → 822
      Glyco_transf_49; Glycosyl-transferase for dystroglycan
    Nucleotide Protein
    Heading Accession and Version

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