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    MIR456 microRNA mir-456 [ Taeniopygia guttata (zebra finch) ]

    Gene ID: 100886562, updated on 13-Aug-2024

    Summary

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    Gene symbol
    MIR456
    Gene description
    microRNA mir-456
    See related
    miRBase:MI0013656
    Gene type
    ncRNA
    RefSeq status
    PROVISIONAL
    Organism
    Taeniopygia guttata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
    Also known as
    tgu-mir-456
    Summary
    microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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    Genomic context

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    See MIR456 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current bTaeGut1.4.pri (GCF_003957565.2) 3 NC_044214.2 (79134695..79134774)
    105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 3 NC_045001.1 (78153593..78153671)

    Chromosome 3 - NC_044214.2Genomic Context describing neighboring genes Neighboring gene Yip1 domain family member 4 Neighboring gene baculoviral IAP repeat containing 6 Neighboring gene uncharacterized LOC105759092 Neighboring gene tetratricopeptide repeat domain 27 Neighboring gene uncharacterized LOC121469745 Neighboring gene uncharacterized LOC115494414

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression. Luo GZ, et al. BMC Genomics, 2012 Dec 26. PMID 23268654, Free PMC Article
    2. The genome of a songbird. Warren WC, et al. Nature, 2010 Apr 1. PMID 20360741, Free PMC Article
    3. miRBase: microRNA sequences, targets and gene nomenclature. Griffiths-Jones S, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381832, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • microRNA 456

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_048969.2 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      RRCB02000018

    RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bTaeGut1.4.pri Primary Assembly

    Genomic

    1. NC_044214.2 Reference bTaeGut1.4.pri Primary Assembly

      Range
      79134695..79134774
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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