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    ndl serine protease nudel [ Drosophila sechellia ]

    Gene ID: 6611034, updated on 13-May-2024

    Summary

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    Gene symbol
    ndl
    Gene description
    serine protease nudel
    Locus tag
    Dsec_GM13834
    See related
    EnsemblRapid:LOC6611034
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM13834; GM13834-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See ndl in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 3L NC_045951.1 (6460511..6469833, complement)

    Chromosome 3L - NC_045951.1Genomic Context describing neighboring genes Neighboring gene N-deacetylase and N-sulfotransferase sfl Neighboring gene beta-Tubulin at 65B Neighboring gene mitochondrial calcium uniporter Neighboring gene protein javelin Neighboring gene RNA exonuclease 5 Neighboring gene zero population growth Neighboring gene BTB/POZ domain-containing protein axundead

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045951.1 Chromosome 3L Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine protease nudel
    Names
    Dsec\GM13834
    Dsec\GM13834-PA
    dsec_GLEANR_14658

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045951.1 Reference ASM438219v1

      Range
      6460511..6469833 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002035555.2 → XP_002035591.2  serine protease nudel

      UniProtKB/TrEMBL
      B4HUV6
      Related
      XP_002035591.2, XM_002035555.2
      Conserved Domains (6) summary
      smart00192
      Location:2352 → 2385
      LDLa; Low-density lipoprotein receptor domain class A
      COG0419
      Location:72 → 225
      SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
      PRK11907
      Location:1515 → 1599
      PRK11907; bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
      cd00112
      Location:2423 → 2459
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      cd00190
      Location:1147 → 1381
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      pfam09342
      Location:2043 → 2160
      DUF1986; Domain of unknown function (DUF1986)
    Nucleotide Protein Strain
    Heading Accession and Version

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