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    F27D4.6 C2H2-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172540, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F27D4.6
    Official Full Name
    C2H2-type domain-containing protein
    Primary source
    WormBase:WBGene00009190
    Locus tag
    CELE_F27D4.6
    See related
    AllianceGenome:WB:WBGene00009190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in pharyngeal neurons. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F27D4.6 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    32
    Sequence:
    Chromosome: I; NC_003279.8 (7731121..7737995)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) Neighboring gene Chromate transporter Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Neuropeptide-Like Protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    C2H2-type domain-containing protein
    NP_001122462.1
    • Confirmed by transcript evidence
    NP_001359589.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      7731121..7737995
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001373100.1 → NP_001359589.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q93620

    2. NM_001128990.3 → NP_001122462.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001122462.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A9QY27
    Nucleotide Protein
    Heading Accession and Version

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