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    wrt-3 Warthog protein 3 [ Caenorhabditis elegans ]

    Gene ID: 177781, updated on 9-Dec-2024

    Summary

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    Official Symbol
    wrt-3
    Official Full Name
    Warthog protein 3
    Primary source
    WormBase:WBGene00006949
    Locus tag
    CELE_F38E11.7
    See related
    AllianceGenome:WB:WBGene00006949
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in extracellular region. Is expressed in hermaphrodite distal tip cell; hypodermis; muscle cell; and pharyngeal gland cell. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See wrt-3 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    8
    Sequence:
    Chromosome: IV; NC_003282.8 (9473633..9477456, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Adenylate kinase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Cyclic nucleotide-binding domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nanoplastics cause transgenerational toxicity through inhibiting germline microRNA mir-38 in C. elegans. Hua X, et al. J Hazard Mater, 2022 Sep 5. PMID 35716568
    2. Induction of protective response to polystyrene nanoparticles associated with methylation regulation in Caenorhabditis elegans. Wang S, et al. Chemosphere, 2021 May. PMID 33453486
    3. Epigenetic response to nanopolystyrene in germline of nematode Caenorhabditis elegans. Yang Y, et al. Ecotoxicol Environ Saf, 2020 Dec 15. PMID 33002821
    4. Transcriptional regulation of HLH-6-independent and subtype-specific genes expressed in the Caenorhabditis elegans pharyngeal glands. Ghai V, et al. Mech Dev, 2012 Sep-Dec. PMID 22759833
    5. Polylactic acid microplastics cause transgenerational reproductive toxicity associated with activation of insulin and hedgehog ligands in C. elegans. Shao Y, et al. Sci Total Environ, 2024 Sep 10. PMID 38851356

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Warthog protein 3
    NP_001294092.1
    • Confirmed by transcript evidence
    NP_001379102.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9473633..9477456 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392370.1 → NP_001379102.1  Warthog protein 3 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q20170, Q9XZF4

    2. NM_001307163.3 → NP_001294092.1  Warthog protein 3 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294092.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      N1NSJ5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q20170.3

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