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    srbc-20 Serpentine Receptor, class BC (Class B-like) [ Caenorhabditis elegans ]

    Gene ID: 183492, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srbc-20
    Official Full Name
    Serpentine Receptor, class BC (Class B-like)
    Primary source
    WormBase:WBGene00016693
    Locus tag
    CELE_C45H4.11
    See related
    AllianceGenome:WB:WBGene00016693
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srbc-20 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (2147095..2148626)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Seven TM Receptor Neighboring gene 7TM_GPCR_Srx domain-containing protein Neighboring gene FIP (Fungus-Induced Protein) Related Neighboring gene tRNA Neighboring gene Uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Deciphering complex genome rearrangements in C. elegans using short-read whole genome sequencing. Maroilley T, et al. Sci Rep, 2021 Sep 14. PMID 34521941, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class BC (Class B-like)
    NP_001300062.1
    • Confirmed by transcript evidence
    NP_001300063.1
    • Confirmed by transcript evidence
    NP_503580.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      2147095..2148626
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071179.4 → NP_503580.2  Serpentine Receptor, class BC (Class B-like) [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503580.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O44692
      Conserved Domains (1) summary
      pfam10316
      Location:1 → 270
      7TM_GPCR_Srbc; Serpentine type 7TM GPCR chemoreceptor Srbc

    2. NM_001313133.3 → NP_001300062.1  Serpentine Receptor, class BC (Class B-like) [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ARW0
      Conserved Domains (1) summary
      pfam10316
      Location:1 → 234
      7TM_GPCR_Srbc; Serpentine type 7TM GPCR chemoreceptor Srbc

    3. NM_001313134.3 → NP_001300063.1  Serpentine Receptor, class BC (Class B-like) [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AVE3
      Conserved Domains (1) summary
      pfam10316
      Location:1 → 96
      7TM_GPCR_Srbc; Serpentine type 7TM GPCR chemoreceptor Srbc

    RNA

    1. NR_132529.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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