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    LCP2 lymphocyte cytosolic protein 2 [ Melopsittacus undulatus (budgerigar) ]

    Gene ID: 101877651, updated on 8-Nov-2024

    Summary

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    Gene symbol
    LCP2
    Gene description
    lymphocyte cytosolic protein 2
    See related
    Ensembl:ENSMUNG00015013401
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Melopsittacus undulatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittaculidae; Melopsittacus
    Orthologs
    human mouse all
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    Genomic context

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    See LCP2 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_11 current bMelUnd1.mat.Z (GCF_012275295.1) 10 NC_047536.1 (2832712..2861488, complement)

    Chromosome 10 - NC_047536.1Genomic Context describing neighboring genes Neighboring gene dedicator of cytokinesis 2 Neighboring gene inhibitory synaptic factor family member 2B Neighboring gene forkhead box I1 Neighboring gene potassium calcium-activated channel subfamily M regulatory beta subunit 1 Neighboring gene potassium voltage-gated channel interacting protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_047536.1 Chromosome 10 Reference bMelUnd1.mat.Z

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lymphocyte cytosolic protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_012275295.1-RS_2024_11

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bMelUnd1.mat.Z

    Genomic

    1. NC_047536.1 Reference bMelUnd1.mat.Z

      Range
      2832712..2861488 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034066930.1 → XP_033922821.1  lymphocyte cytosolic protein 2

      UniProtKB/TrEMBL
      A0A8C6JCU5, A0A8V5GY05
      Related
      ENSMUNP00015018256.1, ENSMUNT00015019246.1
      Conserved Domains (3) summary
      cd09522
      Location:10 → 78
      SAM_SLP76; SAM domain of SLP76 subfamily
      cd09929
      Location:411 → 531
      SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)
      PHA03247
      Location:126 → 411
      PHA03247; large tegument protein UL36; Provisional
    Nucleotide Protein
    Heading Accession and Version

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