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    LOC105242269 zinc finger protein 45 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 105242269, updated on 16-Nov-2023

    Summary

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    Gene symbol
    LOC105242269
    Gene description
    zinc finger protein 45
    Locus tag
    PANDA_020004
    See related
    Ensembl:ENSAMEG00000006129
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Also known as
    ZNF45
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    Genomic context

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    See LOC105242269 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current ASM200744v2 (GCF_002007445.1) 12 NC_048229.1 (34482251..34503920, complement)
    102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219237.1 (159999..181012, complement)

    Chromosome 12 - NC_048229.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 226 Neighboring gene zinc finger protein 234 Neighboring gene zinc finger protein 404 Neighboring gene zinc finger protein 283

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cytokine production IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of immune system process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 45

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200744v2 Primary Assembly

    Genomic

    1. NC_048229.1 Reference ASM200744v2 Primary Assembly

      Range
      34482251..34503920 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034639257.1 → XP_034495148.1  zinc finger protein 45 isoform X2

    2. XM_034639254.1 → XP_034495145.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4
      Related
      ENSAMEP00000006450.1, ENSAMET00000006717.2

    3. XM_034639255.1 → XP_034495146.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4

    4. XM_034639253.1 → XP_034495144.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4

    5. XM_034639252.1 → XP_034495143.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4

    6. XM_034639248.1 → XP_034495139.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4

    7. XM_019810395.2 → XP_019665954.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4

    8. XM_019810394.2 → XP_019665953.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4

    9. XM_034639249.1 → XP_034495140.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4

    10. XM_019810397.2 → XP_019665956.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4

    11. XM_019810392.2 → XP_019665951.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4

    12. XM_034639247.1 → XP_034495138.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4

    13. XM_034639251.1 → XP_034495142.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4

    14. XM_034639256.1 → XP_034495147.1  zinc finger protein 45 isoform X1

      UniProtKB/TrEMBL
      G1LHQ4
    Nucleotide Protein
    Heading Accession and Version

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