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    srt-62 Serpentine Receptor, class T [ Caenorhabditis elegans ]

    Gene ID: 188991, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srt-62
    Official Full Name
    Serpentine Receptor, class T
    Primary source
    WormBase:WBGene00020857
    Locus tag
    CELE_T27C10.2
    See related
    AllianceGenome:WB:WBGene00020857
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srt-62 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    6
    Sequence:
    Chromosome: I; NC_003279.8 (10899089..10902220)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene EF-hand domain-containing protein Neighboring gene Leucine-rich repeat serine/threonine-protein kinase 1 Neighboring gene MO25-like protein 3 Neighboring gene Late endosomal/lysosomal adaptor and MAPK and MTOR activator 1 Neighboring gene G protein-coupled receptor Neighboring gene Carbohydrate sulfotransferase Neighboring gene FBA_2 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class T
    NP_492841.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      10899089..10902220
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060440.5 → NP_492841.3  Serpentine Receptor, class T [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492841.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TZM1
      Conserved Domains (1) summary
      pfam10321
      Location:21 → 285
      7TM_GPCR_Srt; Serpentine type 7TM GPCR chemoreceptor Srt
    Nucleotide Protein
    Heading Accession and Version

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