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    rocf-1 ZP domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 180041, updated on 9-Dec-2024

    Summary

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    Official Symbol
    rocf-1
    Official Full Name
    ZP domain-containing protein
    Primary source
    WormBase:WBGene00011948
    Locus tag
    CELE_T23F1.5
    See related
    AllianceGenome:WB:WBGene00011948
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See rocf-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    11
    Sequence:
    Chromosome: V; NC_003283.11 (15459411..15464502, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Seven TM Receptor Neighboring gene tRNA-Lys Neighboring gene tRNA-Pro Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
    2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ZP domain-containing protein
    NP_506848.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      15459411..15464502 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074447.6 → NP_506848.1  ZP domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506848.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O18117
      Conserved Domains (2) summary
      PHA03247
      Location:561 → 909
      PHA03247; large tegument protein UL36; Provisional
      cl27758
      Location:915 → 1156
      Zona_pellucida; Zona pellucida-like domain
    Nucleotide Protein
    Heading Accession and Version

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