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    dyf-17 Verprolin [ Caenorhabditis elegans ]

    Gene ID: 189733, updated on 9-Dec-2024

    Summary

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    Official Symbol
    dyf-17
    Official Full Name
    Verprolin
    Primary source
    WormBase:WBGene00012673
    Locus tag
    CELE_Y39B6A.11
    See related
    AllianceGenome:WB:WBGene00012673
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Located in ciliary transition zone. Is expressed in nervous system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See dyf-17 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (19127525..19131014)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene BED-type domain-containing protein Neighboring gene ncRNA Neighboring gene tRNA-Phe Neighboring gene Uncharacterized protein Neighboring gene Glycine-rich cell wall structural protein 1.8-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptional profiling of C. elegans DAF-19 uncovers a ciliary base-associated protein and a CDK/CCRK/LF2p-related kinase required for intraflagellar transport. Phirke P, et al. Dev Biol, 2011 Sep 1. PMID 21740898, Free PMC Article
    2. The C. elegans regulatory factor X (RFX) DAF-19M module: A shift from general ciliogenesis to cell-specific ciliary and behavioral specialization. Ahn S, et al. Cell Rep, 2022 Apr 12. PMID 35417689
    3. The relationship between intraflagellar transport and upstream protein trafficking pathways and macrocyclic lactone resistance in Caenorhabditis elegans. Brinzer RA, et al. G3 (Bethesda), 2024 Mar 6. PMID 38227795, Free PMC Article
    4. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
    5. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in ciliary transition zone IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Verprolin
    NP_741687.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      19127525..19131014
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171597.3 → NP_741687.1  Verprolin [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741687.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NET8
    Nucleotide Protein
    Heading Accession and Version

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