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    Zmiz1os1 Zmiz1 opposite strand 1 [ Mus musculus (house mouse) ]

    Gene ID: 414118, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Zmiz1os1provided by MGI
    Official Full Name
    Zmiz1 opposite strand 1provided by MGI
    Primary source
    MGI:MGI:3041228
    See related
    AllianceGenome:MGI:3041228
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Zmiz1as1; C130026E14; D930049A15Rik
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Zmiz1os1 in Genome Data Viewer
    Location:
    14 A3; 14 15.02 cM
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (25255438..25406975, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (25255014..25406786, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 32307 Neighboring gene predicted gene, 32379 Neighboring gene STARR-seq mESC enhancer starr_36208 Neighboring gene predicted gene, 53197 Neighboring gene STARR-seq mESC enhancer starr_36210 Neighboring gene STARR-seq mESC enhancer starr_36211 Neighboring gene predicted gene, 41113 Neighboring gene STARR-seq mESC enhancer starr_36213 Neighboring gene predicted gene, 32645 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:26273941-26274105 Neighboring gene zinc finger, MIZ-type containing 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:26336443-26336626 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:26336816-26337032 Neighboring gene STARR-positive B cell enhancer mm9_chr14:26346851-26347151 Neighboring gene STARR-positive B cell enhancer mm9_chr14:26385131-26385431 Neighboring gene microRNA 3075 Neighboring gene RIKEN cDNA 4931406H21 gene Neighboring gene VISTA enhancer mm1678 Neighboring gene STARR-seq mESC enhancer starr_36215 Neighboring gene predicted gene, 32497

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • Zmiz1 antisense RNA 1

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      25255438..25406975 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003951078.2 RNA Sequence

    2. XR_874461.4 RNA Sequence

    3. XR_874460.4 RNA Sequence

    4. XR_874452.4 RNA Sequence

    5. XR_001781189.2 RNA Sequence

    6. XR_003951080.2 RNA Sequence

    7. XR_004938540.1 RNA Sequence

    8. XR_003951079.2 RNA Sequence

    9. XR_383294.5 RNA Sequence

    10. XR_004938538.1 RNA Sequence

    11. XR_004938539.1 RNA Sequence

    12. XR_383295.4 RNA Sequence

    13. XR_004938537.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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