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    Gm30003 predicted gene, 30003 [ Mus musculus (house mouse) ]

    Gene ID: 102631739, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm30003provided by MGI
    Official Full Name
    predicted gene, 30003provided by MGI
    Primary source
    MGI:MGI:5589162
    See related
    AllianceGenome:MGI:5589162
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm43278
    Expression
    Broad expression in lung adult (RPKM 5.2), subcutaneous fat pad adult (RPKM 2.0) and 17 other tissues See more
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    Genomic context

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    See Gm30003 in Genome Data Viewer
    Location:
    5 G2; 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (134774304..134851822)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (134745712..134822968)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4H Neighboring gene LIM domain kinase 1 Neighboring gene STARR-positive B cell enhancer ABC_E1309 Neighboring gene predicted gene 10369 Neighboring gene STARR-positive B cell enhancer mm9_chr5:135180028-135180329 Neighboring gene elastin Neighboring gene STARR-seq mESC enhancer starr_14552 Neighboring gene transmembrane protein 270 Neighboring gene claudin 13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      134774304..134851822
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_868585.4 RNA Sequence

    2. XR_868587.4 RNA Sequence

    3. XR_003955804.2 RNA Sequence

    4. XR_868583.4 RNA Sequence

    5. XR_003955805.2 RNA Sequence

    6. XR_868582.4 RNA Sequence

    7. XR_868586.4 RNA Sequence

    8. XR_377128.3 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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