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    Foxp1 forkhead box P1 [ Mus musculus (house mouse) ]

    Gene ID: 108655, updated on 27-Nov-2024

    Summary

    Official Symbol
    Foxp1provided by MGI
    Official Full Name
    forkhead box P1provided by MGI
    Primary source
    MGI:MGI:1914004
    See related
    Ensembl:ENSMUSG00000030067 AllianceGenome:MGI:1914004
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    3110052D19Rik; 4932443N09Rik
    Summary
    Enables several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; identical protein binding activity; and transcription coregulator binding activity. Involved in T follicular helper cell differentiation; nervous system development; and regulation of gene expression. Acts upstream of or within with a positive effect on regulation of androgen receptor signaling pathway. Acts upstream of or within several processes, including positive regulation of cell population proliferation; regulation of gene expression; and striated muscle tissue development. Located in nucleus. Is expressed in several structures, including alimentary system; brain; embryo mesenchyme; genitourinary system; and musculoskeletal system. Human ortholog(s) of this gene implicated in several diseases, including Barrett's esophagus; congenital heart disease; esophagus adenocarcinoma; intellectual disability-severe speech delay-mild dysmorphism syndrome; and peritonitis. Orthologous to human FOXP1 (forkhead box P1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in spleen adult (RPKM 9.3), lung adult (RPKM 7.6) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Foxp1 in Genome Data Viewer
    Location:
    6 D3; 6 45.74 cM
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (98902303..99510587, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (98925342..99522746, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930595L18 gene Neighboring gene STARR-seq mESC enhancer starr_16815 Neighboring gene STARR-seq mESC enhancer starr_16816 Neighboring gene STARR-seq mESC enhancer starr_16817 Neighboring gene predicted gene, 32308 Neighboring gene STARR-positive B cell enhancer mm9_chr6:98942692-98942992 Neighboring gene STARR-positive B cell enhancer mm9_chr6:98957529-98957830 Neighboring gene STARR-positive B cell enhancer ABC_E2196 Neighboring gene STARR-positive B cell enhancer mm9_chr6:99007212-99007513 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:99046157-99046340 Neighboring gene predicted gene, 19665 Neighboring gene STARR-positive B cell enhancer mm9_chr6:99138580-99138880 Neighboring gene predicted gene, 38865 Neighboring gene STARR-seq mESC enhancer starr_16824 Neighboring gene microRNA 12201 Neighboring gene STARR-positive B cell enhancer mm9_chr6:99211544-99211845 Neighboring gene STARR-positive B cell enhancer mm9_chr6:99214819-99215119 Neighboring gene STARR-positive B cell enhancer ABC_E4848 Neighboring gene predicted gene, 52870 Neighboring gene STARR-seq mESC enhancer starr_16826 Neighboring gene STARR-positive B cell enhancer ABC_E6458 Neighboring gene STARR-positive B cell enhancer ABC_E4849 Neighboring gene STARR-positive B cell enhancer ABC_E6459 Neighboring gene STARR-seq mESC enhancer starr_16827 Neighboring gene STARR-seq mESC enhancer starr_16828 Neighboring gene STARR-seq mESC enhancer starr_16829 Neighboring gene predicted gene, 32882 Neighboring gene STARR-seq mESC enhancer starr_16831 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:99473114-99473223 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:99472882-99473069 Neighboring gene STARR-seq mESC enhancer starr_16834 Neighboring gene STARR-seq mESC enhancer starr_16835 Neighboring gene STARR-seq mESC enhancer starr_16836 Neighboring gene STARR-positive B cell enhancer mm9_chr6:99575045-99575346 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:99608680-99608863 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:99616004-99616187 Neighboring gene eukaryotic translation initiation factor 4E member 3 Neighboring gene predicted gene, 52869 Neighboring gene G protein-coupled receptor 27

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription factor activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IC
    Inferred by Curator
    more info
     
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables chromatin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables core promoter sequence-specific DNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nuclear androgen receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables sequence-specific double-stranded DNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables transcription cis-regulatory region binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables transcription coregulator binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in T follicular helper cell differentiation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within cardiac muscle cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cellular response to ionomycin ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within embryo development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within embryo development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in endothelial cell activation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in endothelial cell activation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within heart development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within immunoglobulin V(D)J recombination IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of innate vocalization behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within lung development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within lung secretory cell differentiation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in macrophage activation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in macrophage activation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in monocyte activation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in monocyte activation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in motor neuron axon guidance IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of B cell apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of B cell apoptotic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within negative regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of DNA-templated transcription ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of androgen receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of androgen receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of cell growth involved in cardiac muscle cell development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of gene expression ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within negative regulation of lung goblet cell differentiation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of transcription by RNA polymerase II IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in negative regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in osteoclast development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in osteoclast development ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in osteoclast differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in osteoclast differentiation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of B cell receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of DNA-templated transcription IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of TORC1 signaling IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of endothelial cell migration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of endothelial cell migration ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within positive regulation of epithelial cell proliferation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of hydrogen peroxide-mediated programmed cell death ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of immunoglobulin production IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of interleukin-21 production IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of mesenchymal cell proliferation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of smooth muscle cell proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of smooth muscle cell proliferation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within pre-B cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of regulation of action potential IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within_positive_effect regulation of androgen receptor signaling pathway IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within regulation of cardiac muscle cell proliferation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within regulation of cardiac muscle cell proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of chemokine (C-X-C motif) ligand 2 production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of chemokine (C-X-C motif) ligand 2 production ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of defense response to bacterium ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of defense response to bacterium ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of endothelial tube morphogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of gene expression ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of inflammatory response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of interleukin-1 beta production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of interleukin-12 production ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within regulation of lung goblet cell differentiation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in regulation of macrophage colony-stimulating factor production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of macrophage colony-stimulating factor production ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of monocyte differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of monocyte differentiation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of tumor necrosis factor production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of tumor necrosis factor production ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in response to lipopolysaccharide ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to lipopolysaccharide ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within skeletal muscle tissue development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within smooth muscle tissue development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of transcription by RNA polymerase II IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in ventral spinal cord development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IC
    Inferred by Curator
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    forkhead box protein P1
    Names
    forkhead-related transcription factor 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001197321.1NP_001184250.1  forkhead box protein P1 isoform 2

      See identical proteins and their annotated locations for NP_001184250.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR and uses an alternate in-frame splice junction at the 5' end of an exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
      Source sequence(s)
      AA451299, AC125137, AI508521, BC064764
      Consensus CDS
      CCDS57442.1
      UniProtKB/TrEMBL
      A0A0R4J1H9, H3BJM1
      Related
      ENSMUSP00000108952.3, ENSMUST00000113326.9
      Conserved Domains (2) summary
      cd00059
      Location:461533
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:298365
      FOXP-CC; FOXP coiled-coil domain
    2. NM_001197322.1NP_001184251.1  forkhead box protein P1 isoform 3

      See identical proteins and their annotated locations for NP_001184251.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (3) is shorter at the N-terminus compared to isoform 1.
      Source sequence(s)
      AC125137, AI508521, AK077062
      Consensus CDS
      CCDS57441.1
      UniProtKB/TrEMBL
      A0A0R4J282, H3BL33
      Related
      ENSMUSP00000135809.2, ENSMUST00000177437.8
      Conserved Domains (3) summary
      COG5025
      Location:336550
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:364436
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:201268
      FOXP-CC; FOXP coiled-coil domain
    3. NM_001347345.1NP_001334274.1  forkhead box protein P1 isoform 4

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) differs in the 5' UTR and has multiple coding region differences, compared to variant 1. It encodes isoform 4. Isoforms 1 and 4 are identical in length but have distinct peptide sequences.
      Source sequence(s)
      AB594192, AC125137
      Consensus CDS
      CCDS85105.1
      UniProtKB/TrEMBL
      D3Z6Q4, E2S038
      Related
      ENSMUSP00000135181.2, ENSMUST00000176565.8
      Conserved Domains (3) summary
      COG5025
      Location:466679
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:493565
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:331398
      FOXP-CC; FOXP coiled-coil domain
    4. NM_053202.2NP_444432.1  forkhead box protein P1 isoform 1

      See identical proteins and their annotated locations for NP_444432.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longest isoform (1). Isoforms 1 and 4 are identical in length but have distinct peptide sequences.
      Source sequence(s)
      AC125137, AC132579, AC155839, AC163199
      Consensus CDS
      CCDS39578.1
      UniProtKB/Swiss-Prot
      P58462, Q6P221, Q8C5V2, Q8CCD9
      UniProtKB/TrEMBL
      D3Z6Q4
      Related
      ENSMUSP00000108948.3, ENSMUST00000113322.9
      Conserved Domains (3) summary
      COG5025
      Location:465679
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:330397
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:492573
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      98902303..99510587 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036165732.1XP_036021625.1  forkhead box protein P1 isoform X3

      UniProtKB/TrEMBL
      D3Z6Q4, H3BLF2
      Conserved Domains (3) summary
      COG5025
      Location:467680
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:493574
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    2. XM_036165728.1XP_036021621.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    3. XM_006505316.5XP_006505379.1  forkhead box protein P1 isoform X4

      See identical proteins and their annotated locations for XP_006505379.1

      UniProtKB/TrEMBL
      D3Z6Q4, E2S038
      Conserved Domains (3) summary
      COG5025
      Location:466679
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:493565
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:331398
      FOXP-CC; FOXP coiled-coil domain
    4. XM_030255064.2XP_030110924.1  forkhead box protein P1 isoform X2

      UniProtKB/TrEMBL
      D3Z6Q3, D3Z6Q4
      Related
      ENSMUSP00000108954.3, ENSMUST00000113328.9
      Conserved Domains (3) summary
      COG5025
      Location:466680
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:494566
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:331398
      FOXP-CC; FOXP coiled-coil domain
    5. XM_030255065.2XP_030110925.1  forkhead box protein P1 isoform X3

      UniProtKB/TrEMBL
      D3Z6Q4, H3BLF2
      Conserved Domains (3) summary
      COG5025
      Location:467680
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:493574
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    6. XM_030255066.2XP_030110926.1  forkhead box protein P1 isoform X3

      UniProtKB/TrEMBL
      D3Z6Q4, H3BLF2
      Conserved Domains (3) summary
      COG5025
      Location:467680
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:493574
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    7. XM_006505314.5XP_006505377.1  forkhead box protein P1 isoform X2

      UniProtKB/TrEMBL
      D3Z6Q3, D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:466680
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:494566
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:331398
      FOXP-CC; FOXP coiled-coil domain
    8. XM_006505315.5XP_006505378.1  forkhead box protein P1 isoform X3

      UniProtKB/TrEMBL
      D3Z6Q4, H3BLF2
      Conserved Domains (3) summary
      COG5025
      Location:467680
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:493574
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    9. XM_017321301.3XP_017176790.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    10. XM_017321303.3XP_017176792.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    11. XM_006505308.5XP_006505371.1  forkhead box protein P1 isoform X1

      See identical proteins and their annotated locations for XP_006505371.1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    12. XM_036165729.1XP_036021622.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    13. XM_036165731.1XP_036021624.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    14. XM_036165730.1XP_036021623.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      D3Z6Q4
      Related
      ENSMUSP00000135041.2, ENSMUST00000176850.8
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    15. XM_017321302.1XP_017176791.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    16. XM_017321304.3XP_017176793.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    17. XM_006505310.5XP_006505373.1  forkhead box protein P1 isoform X1

      See identical proteins and their annotated locations for XP_006505373.1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    18. XM_006505311.5XP_006505374.1  forkhead box protein P1 isoform X1

      See identical proteins and their annotated locations for XP_006505374.1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    19. XM_006505312.4XP_006505375.1  forkhead box protein P1 isoform X1

      See identical proteins and their annotated locations for XP_006505375.1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    20. XM_030255063.2XP_030110923.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    21. XM_030255062.2XP_030110922.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      D3Z6Q4
      Related
      ENSMUSP00000108950.3, ENSMUST00000113324.9
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    22. XM_030255061.2XP_030110921.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    23. XM_030255067.2XP_030110927.1  forkhead box protein P1 isoform X3

      UniProtKB/TrEMBL
      D3Z6Q4, H3BLF2
      Related
      ENSMUSP00000135764.2, ENSMUST00000177307.8
      Conserved Domains (3) summary
      COG5025
      Location:467680
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:493574
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    24. XM_006505313.4XP_006505376.1  forkhead box protein P1 isoform X1

      See identical proteins and their annotated locations for XP_006505376.1

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (3) summary
      COG5025
      Location:467681
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:494575
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    25. XM_030255074.1XP_030110934.1  forkhead box protein P1 isoform X8

      UniProtKB/TrEMBL
      D3Z6Q4
      Conserved Domains (2) summary
      cd00059
      Location:495567
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:332399
      FOXP-CC; FOXP coiled-coil domain
    26. XM_030255068.2XP_030110928.1  forkhead box protein P1 isoform X5

      UniProtKB/TrEMBL
      H3BJ24, H3BJM1
      Conserved Domains (3) summary
      COG5025
      Location:337551
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:365437
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:202269
      FOXP-CC; FOXP coiled-coil domain
    27. XM_030255069.2XP_030110929.1  forkhead box protein P1 isoform X6

      UniProtKB/TrEMBL
      A0A0R4J282, H3BL33
      Conserved Domains (3) summary
      COG5025
      Location:336550
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:364436
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:201268
      FOXP-CC; FOXP coiled-coil domain
    28. XM_030255070.2XP_030110930.1  forkhead box protein P1 isoform X7

      UniProtKB/TrEMBL
      H3BJM1
      Conserved Domains (3) summary
      COG5025
      Location:337550
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:202269
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:363444
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    29. XM_017321305.3XP_017176794.1  forkhead box protein P1 isoform X5

      UniProtKB/TrEMBL
      H3BJ24, H3BJM1
      Conserved Domains (3) summary
      COG5025
      Location:337551
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:365437
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:202269
      FOXP-CC; FOXP coiled-coil domain
    30. XM_006505323.4XP_006505386.1  forkhead box protein P1 isoform X6

      See identical proteins and their annotated locations for XP_006505386.1

      UniProtKB/TrEMBL
      A0A0R4J282, H3BL33
      Conserved Domains (3) summary
      COG5025
      Location:336550
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:364436
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:201268
      FOXP-CC; FOXP coiled-coil domain
    31. XM_006505320.4XP_006505383.1  forkhead box protein P1 isoform X5

      See identical proteins and their annotated locations for XP_006505383.1

      UniProtKB/TrEMBL
      H3BJ24, H3BJM1
      Conserved Domains (3) summary
      COG5025
      Location:337551
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:365437
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:202269
      FOXP-CC; FOXP coiled-coil domain
    32. XM_036165733.1XP_036021626.1  forkhead box protein P1 isoform X7

      UniProtKB/TrEMBL
      H3BJM1
      Conserved Domains (3) summary
      COG5025
      Location:337550
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:202269
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:363444
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    33. XM_006505319.1XP_006505382.1  forkhead box protein P1 isoform X5

      See identical proteins and their annotated locations for XP_006505382.1

      UniProtKB/TrEMBL
      H3BJ24, H3BJM1
      Conserved Domains (3) summary
      COG5025
      Location:337551
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:365437
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:202269
      FOXP-CC; FOXP coiled-coil domain
    34. XM_006505322.1XP_006505385.1  forkhead box protein P1 isoform X6

      See identical proteins and their annotated locations for XP_006505385.1

      UniProtKB/TrEMBL
      A0A0R4J282, H3BL33
      Conserved Domains (3) summary
      COG5025
      Location:336550
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:364436
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:201268
      FOXP-CC; FOXP coiled-coil domain
    35. XM_017321306.3XP_017176795.1  forkhead box protein P1 isoform X5

      UniProtKB/TrEMBL
      H3BJ24, H3BJM1
      Related
      ENSMUSP00000134817.2, ENSMUST00000177229.8
      Conserved Domains (3) summary
      COG5025
      Location:337551
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:365437
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:202269
      FOXP-CC; FOXP coiled-coil domain
    36. XM_030255071.2XP_030110931.1  forkhead box protein P1 isoform X7

      UniProtKB/TrEMBL
      H3BJM1
      Conserved Domains (3) summary
      COG5025
      Location:337550
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      pfam16159
      Location:202269
      FOXP-CC; FOXP coiled-coil domain
      cd20065
      Location:363444
      FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
    37. XM_006505321.1XP_006505384.1  forkhead box protein P1 isoform X5

      See identical proteins and their annotated locations for XP_006505384.1

      UniProtKB/TrEMBL
      H3BJ24, H3BJM1
      Conserved Domains (3) summary
      COG5025
      Location:337551
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
      cd00059
      Location:365437
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:202269
      FOXP-CC; FOXP coiled-coil domain

    RNA

    1. XR_004942888.1 RNA Sequence

    2. XR_003956146.2 RNA Sequence

    3. XR_004942890.1 RNA Sequence

    4. XR_004942889.1 RNA Sequence