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    WDFY3 WD repeat and FYVE domain containing 3 [ Rousettus aegyptiacus (Egyptian rousette) ]

    Gene ID: 107516443, updated on 30-Mar-2024

    Summary

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    Gene symbol
    WDFY3
    Gene description
    WD repeat and FYVE domain containing 3
    Locus tag
    HJG63_020586
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rousettus aegyptiacus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus
    Orthologs
    human mouse all
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    Genomic context

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    See WDFY3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    70
    Annotation release Status Assembly Chr Location
    101 current mRouAeg1.p (GCF_014176215.1) Unplaced Scaffold NW_023416285.1 (42718731..42942220)
    100 previous assembly Raegyp2.0 (GCF_001466805.2) Unplaced Scaffold NW_015494621.1 (429855..633417)

    NW_023416285.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene ubiquitin-conjugating enzyme E2 L3-like Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene CDP-diacylglycerol synthase 1 Neighboring gene NK6 homeobox 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat and FYVE domain-containing protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rousettus aegyptiacus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mRouAeg1.p

    Genomic

    1. NW_023416285.1 Reference mRouAeg1.p

      Range
      42718731..42942220
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036227766.1 → XP_036083659.1  WD repeat and FYVE domain-containing protein 3 isoform X1

      Conserved Domains (6) summary
      cd01201
      Location:2551 → 2674
      PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
      cd15719
      Location:3467 → 3531
      FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
      sd00039
      Location:3101 → 3142
      7WD40; WD40 repeat [structural motif]
      pfam02138
      Location:2713 → 2993
      Beach; Beige/BEACH domain
      cl22861
      Location:1196 → 1266
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl29593
      Location:3083 → 3264
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_036227765.1 → XP_036083658.1  WD repeat and FYVE domain-containing protein 3 isoform X1

      Conserved Domains (6) summary
      cd01201
      Location:2551 → 2674
      PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
      cd15719
      Location:3467 → 3531
      FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
      sd00039
      Location:3101 → 3142
      7WD40; WD40 repeat [structural motif]
      pfam02138
      Location:2713 → 2993
      Beach; Beige/BEACH domain
      cl22861
      Location:1196 → 1266
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl29593
      Location:3083 → 3264
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    3. XM_036227769.1 → XP_036083662.1  WD repeat and FYVE domain-containing protein 3 isoform X4

      Conserved Domains (6) summary
      cd01201
      Location:2533 → 2656
      PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
      cd15719
      Location:3449 → 3513
      FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
      sd00039
      Location:3083 → 3124
      7WD40; WD40 repeat [structural motif]
      pfam02138
      Location:2695 → 2975
      Beach; Beige/BEACH domain
      cl22861
      Location:1196 → 1266
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl29593
      Location:3065 → 3246
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    4. XM_036227773.1 → XP_036083666.1  WD repeat and FYVE domain-containing protein 3 isoform X8

      Conserved Domains (6) summary
      cd01201
      Location:2512 → 2635
      PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
      cd15719
      Location:3428 → 3492
      FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
      sd00039
      Location:3062 → 3103
      7WD40; WD40 repeat [structural motif]
      pfam02138
      Location:2674 → 2954
      Beach; Beige/BEACH domain
      cl22861
      Location:1196 → 1266
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl29593
      Location:3044 → 3225
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    5. XM_036227767.1 → XP_036083660.1  WD repeat and FYVE domain-containing protein 3 isoform X2

      Conserved Domains (6) summary
      cd01201
      Location:2536 → 2659
      PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
      cd15719
      Location:3452 → 3516
      FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
      sd00039
      Location:3086 → 3127
      7WD40; WD40 repeat [structural motif]
      pfam02138
      Location:2698 → 2978
      Beach; Beige/BEACH domain
      cl22861
      Location:1196 → 1266
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl29593
      Location:3068 → 3249
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    6. XM_036227771.1 → XP_036083664.1  WD repeat and FYVE domain-containing protein 3 isoform X6

      Conserved Domains (6) summary
      cd01201
      Location:2518 → 2641
      PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
      cd15719
      Location:3434 → 3498
      FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
      sd00039
      Location:3068 → 3109
      7WD40; WD40 repeat [structural motif]
      pfam02138
      Location:2680 → 2960
      Beach; Beige/BEACH domain
      cl22861
      Location:1196 → 1266
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl29593
      Location:3050 → 3231
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    7. XM_036227770.1 → XP_036083663.1  WD repeat and FYVE domain-containing protein 3 isoform X5

      Conserved Domains (6) summary
      cd01201
      Location:2523 → 2646
      PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
      cd15719
      Location:3439 → 3503
      FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
      sd00039
      Location:3073 → 3114
      7WD40; WD40 repeat [structural motif]
      pfam02138
      Location:2685 → 2965
      Beach; Beige/BEACH domain
      cl22861
      Location:1168 → 1238
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl29593
      Location:3055 → 3236
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    8. XM_036227768.1 → XP_036083661.1  WD repeat and FYVE domain-containing protein 3 isoform X3

      UniProtKB/TrEMBL
      A0A7J8EBD8
      Conserved Domains (6) summary
      cd01201
      Location:2533 → 2656
      PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
      cd15719
      Location:3449 → 3513
      FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
      sd00039
      Location:3083 → 3124
      7WD40; WD40 repeat [structural motif]
      pfam02138
      Location:2695 → 2975
      Beach; Beige/BEACH domain
      cl22861
      Location:1178 → 1248
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl29593
      Location:3065 → 3246
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    9. XM_036227772.1 → XP_036083665.1  WD repeat and FYVE domain-containing protein 3 isoform X7

      Conserved Domains (6) summary
      cd01201
      Location:2515 → 2638
      PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
      cd15719
      Location:3431 → 3495
      FYVE_WDFY3; FYVE domain found in WD40 repeat and FYVE domain-containing protein 3 (WDFY3) and similar proteins
      sd00039
      Location:3065 → 3106
      7WD40; WD40 repeat [structural motif]
      pfam02138
      Location:2677 → 2957
      Beach; Beige/BEACH domain
      cl22861
      Location:1178 → 1248
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      cl29593
      Location:3047 → 3228
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    10. XM_036227774.1 → XP_036083667.1  WD repeat and FYVE domain-containing protein 3 isoform X9

      Conserved Domains (3) summary
      cd01201
      Location:2551 → 2674
      PH_BEACH; Pleckstrin homology domain in BEACH domain containing proteins
      pfam02138
      Location:2713 → 2831
      Beach; Beige/BEACH domain
      cl22861
      Location:1196 → 1266
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    Nucleotide Protein
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